D. rerio Gene: syne3 - ENSDARG00000023237 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000023237
Namesyne3
Descriptionspectrin repeat containing, nuclear envelope family member 3 [Source:ZFIN;Acc:ZDB-GENE-070209-271]
OrganismDanio rerio (zebrafish)
Synonym(s)nesp3, nesprin 3, zgc:158327

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreSources
UBERON:0000468multi-cellular organism
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000005Cleavage:16-cell
1.52e3
  • 1.52e3
  • 7.40e3
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
2.87e3
  • 2.87e3
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
6.97e3
  • 6.97e3
  • 7.07e3
  • 8.39e3
  • 8.96e3
  • 1.29e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
8.63e3
  • 8.63e3
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
9.03e3
  • 9.03e3
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
9.76e3
  • 9.76e3
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
9.84e3
  • 9.84e3
AEIR
  • AEIR
UBERON:0014892skeletal muscle organ
  • ZFS:0000029Pharyngula:Prim-5
9.86e3
  • 9.86e3
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
9.89e3
  • 9.89e3
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
9.91e3
  • 9.91e3
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.06e4
  • 1.06e4
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.07e4
  • 1.07e4
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.11e4
  • 1.11e4
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.15e4
  • 1.15e4
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.16e4
  • 1.16e4
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.19e4
  • 1.19e4
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.26e4
  • 1.26e4
  • 1.44e4
AEIR
  • AEIR
  • AEIR
UBERON:0001003skin epidermis
  • ZFS:0000029Pharyngula:Prim-5
1.27e4
  • 1.27e4
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.29e4
  • 1.29e4
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.51e4
  • 1.51e4
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation
Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.
Sources of annotations to anatomy and development:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Cross-references

EMBLCR450701
EnsemblENSDARG00000023237 (syne3)
Uniprot/SPTREMBLF1QH65, F1QH65_DANRE, X1WGA9, X1WGA9_DANRE
ZFINZDB-GENE-070209-271 (syne3)

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