D. rerio Gene: tfap2d - ENSDARG00000023272 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000023272
Nametfap2d
Descriptiontranscription factor AP-2 delta (activating enhancer binding protein 2 delta) [Source:ZFIN;Acc:ZDB-GENE-050913-99]
OrganismDanio rerio (zebrafish)
Synonym(s)q4v8r1, si:dkey-5e16.2, zgc:114196
Orthologs(s)19 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.99e3
  • 1.99e3
93.35
  • 93.35
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
4.94e3
  • 4.94e3
  • 2.05e4
83.46
  • 83.46
  • 31.48
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
6.38e3
  • 6.38e3
  • 1.29e4
78.63
  • 78.63
  • 56.79
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
7.26e3
  • 7.26e3
  • 1.04e4
  • 1.63e4
  • 2.03e4
  • 2.04e4
75.70
  • 75.70
  • 65.05
  • 45.47
  • 32.12
  • 31.55
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
8.82e3
  • 8.82e3
  • 1.14e4
70.47
  • 70.47
  • 61.74
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
9.29e3
  • 9.29e3
68.91
  • 68.91
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.18e4
  • 1.18e4
60.61
  • 60.61
AEIR
  • AEIR
UBERON:0001891midbrain
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000031Pharyngula:Prim-25
1.20e4
  • 1.20e4
  • 1.32e4
59.98
  • 59.98
  • 55.86
AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.31e4
  • 1.31e4
56.23
  • 56.23
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
1.33e4
  • 1.33e4
55.42
  • 55.42
AEIR
  • AEIR
UBERON:0001945superior colliculus
  • ZFS:0000033Hatching:Long-pec
1.34e4
  • 1.34e4
55.24
  • 55.24
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.35e4
  • 1.35e4
54.63
  • 54.63
AEIR
  • AEIR
UBERON:0001943midbrain tegmentum
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
1.40e4
  • 1.40e4
  • 1.41e4
53.10
  • 53.10
  • 52.92
AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.51e4
  • 1.51e4
49.39
  • 49.39
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
2.01e4
  • 2.01e4
32.63
  • 32.63
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.18e4
  • 2.18e4
27.10
  • 27.10
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.28e4
  • 2.28e4
23.73
  • 23.73
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.60e4
  • 2.60e4
13.11
  • 13.11
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Orthologs

Cross-references

EnsemblENSDARG00000023272 (tfap2d)
ZFINZDB-GENE-050913-99 (tfap2d)
EMBLBC097244, BX005121
Uniprot/SWISSPROTAP2D_DANRE, Q5RJ20

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