D. rerio Gene: pinx1 - ENSDARG00000023532 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000023532
Namepinx1
DescriptionPIN2/TERF1 interacting, telomerase inhibitor 1 [Source:ZFIN;Acc:ZDB-GENE-030515-2]
OrganismDanio rerio (zebrafish)
Synonym(s)cb342, lpts, zlpts

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
788
  • 788
  • 819
  • 2.96e3
  • 4.54e3
  • 4.57e3
97.37
  • 97.37
  • 97.26
  • 90.11
  • 84.81
  • 84.71
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000037Larval:Day 5
  • UBERON:00072322 cell stage
  • UBERON:00072368 cell stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000036Larval:Day 4
  • ZFS:0000014Blastula:Sphere
  • UBERON:0000109gastrula stage
  • UBERON:0000068embryo stage
  • UBERON:0000066fully formed stage
826
  • 826
  • 2.84e3
  • 3.40e3
  • 3.46e3
  • 3.68e3
  • 3.82e3
  • 4.37e3
  • 4.55e3
  • 4.64e3
  • 5.37e3
  • 6.13e3
  • 6.67e3
  • 6.79e3
  • 6.79e3
  • 7.49e3
  • 7.91e3
  • 8.32e3
  • 8.96e3
  • 1.19e4
  • 1.39e4
  • 1.46e4
97.24
  • 97.24
  • 90.51
  • 88.61
  • 88.43
  • 87.69
  • 87.20
  • 85.36
  • 84.78
  • 84.48
  • 82.02
  • 79.47
  • 77.67
  • 77.27
  • 77.27
  • 74.93
  • 73.52
  • 72.13
  • 69.99
  • 60.00
  • 53.44
  • 51.12
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000026Segmentation:14-19 somites
930
  • 930
  • 1.12e4
  • 1.12e4
  • 1.18e4
  • 1.29e4
96.89
  • 96.89
  • 62.48
  • 62.48
  • 60.39
  • 56.86
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
1.59e3
  • 1.59e3
94.66
  • 94.66
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000109gastrula stage
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
1.64e3
  • 1.64e3
  • 2.97e3
  • 3.50e3
  • 4.85e3
  • 4.87e3
  • 6.21e3
94.50
  • 94.50
  • 90.07
  • 88.28
  • 83.77
  • 83.70
  • 79.22
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.81e3
  • 1.81e3
93.94
  • 93.94
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.87e3
  • 1.87e3
93.73
  • 93.73
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
2.18e3
  • 2.18e3
92.70
  • 92.70
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
2.30e3
  • 2.30e3
92.29
  • 92.29
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
2.32e3
  • 2.32e3
92.22
  • 92.22
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
2.60e3
  • 2.60e3
91.30
  • 91.30
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
2.69e3
  • 2.69e3
  • 3.62e3
  • 3.68e3
  • 4.03e3
  • 4.44e3
  • 4.57e3
  • 5.25e3
  • 5.27e3
  • 6.57e3
  • 8.03e3
91.01
  • 91.01
  • 87.89
  • 87.68
  • 86.51
  • 85.14
  • 84.71
  • 82.44
  • 82.35
  • 78.01
  • 73.13
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000024Segmentation:5-9 somites
2.88e3
  • 2.88e3
  • 1.28e4
  • 1.29e4
90.36
  • 90.36
  • 57.12
  • 56.79
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
3.09e3
  • 3.09e3
89.66
  • 89.66
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
3.29e3
  • 3.29e3
88.99
  • 88.99
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
3.51e3
  • 3.51e3
  • 1.20e4
  • 1.21e4
  • 1.24e4
  • 1.28e4
88.26
  • 88.26
  • 59.98
  • 59.36
  • 58.32
  • 57.12
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
3.73e3
  • 3.73e3
87.52
  • 87.52
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
4.05e3
  • 4.05e3
86.45
  • 86.45
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
4.05e3
  • 4.05e3
86.44
  • 86.44
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
4.34e3
  • 4.34e3
  • 5.44e3
85.47
  • 85.47
  • 81.79
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
4.47e3
  • 4.47e3
  • 6.27e3
85.02
  • 85.02
  • 79.02
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
4.72e3
  • 4.72e3
84.19
  • 84.19
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
4.98e3
  • 4.98e3
83.31
  • 83.31
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
5.15e3
  • 5.15e3
82.76
  • 82.76
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
5.17e3
  • 5.17e3
  • 7.01e3
82.70
  • 82.70
  • 76.53
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
5.71e3
  • 5.71e3
  • 9.08e3
80.88
  • 80.88
  • 69.59
AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
6.00e3
  • 6.00e3
79.91
  • 79.91
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000032Pharyngula:High-pec
6.12e3
  • 6.12e3
  • 7.53e3
  • 9.40e3
  • 1.16e4
  • 1.23e4
  • 1.27e4
79.52
  • 79.52
  • 74.79
  • 68.52
  • 61.15
  • 58.67
  • 57.47
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
6.24e3
  • 6.24e3
79.12
  • 79.12
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
6.58e3
  • 6.58e3
77.98
  • 77.98
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
7.15e3
  • 7.15e3
  • 7.75e3
  • 1.12e4
76.05
  • 76.05
  • 74.07
  • 62.38
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
8.04e3
  • 8.04e3
  • 9.25e3
  • 9.67e3
  • 9.71e3
  • 9.96e3
  • 9.96e3
73.07
  • 73.07
  • 69.03
  • 67.63
  • 67.48
  • 66.65
  • 66.65
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
9.60e3
  • 9.60e3
67.85
  • 67.85
AEIR
  • AEIR
UBERON:0001555digestive tract
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000032Pharyngula:High-pec
1.21e4
  • 1.21e4
  • 1.26e4
  • 1.28e4
  • 1.28e4
59.36
  • 59.36
  • 57.68
  • 57.13
  • 57.13
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002533post-anal tail bud
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
1.25e4
  • 1.25e4
  • 1.25e4
  • 1.33e4
58.31
  • 58.31
  • 58.31
  • 55.53
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000035Larval:Protruding-mouth
1.30e4
  • 1.30e4
56.48
  • 56.48
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EnsemblENSDARG00000023532 (pinx1)
ZFINZDB-GENE-030515-2 (pinx1)
EMBLBX510941
Uniprot/SPTREMBLQ5RHK8, Q5RHK8_DANRE

Do not show this banner again