D. rerio Gene: nrbf2b - ENSDARG00000023591 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000023591
Namenrbf2b
Descriptionnuclear receptor binding factor 2b [Source:ZFIN;Acc:ZDB-GENE-040718-357]
OrganismDanio rerio (zebrafish)
Synonym(s)fm80e07, nrbf2, nrbf2 {eco:0000313|embl:aah75978.1,gn eco:0000313|zfin:zdb-gene-040718-357}, wu:fb26d03, wu:fm80e07, zgc:92273

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
1.00e3
  • 1.00e3
  • 6.60e3
  • 7.14e3
  • 8.74e3
96.65
  • 96.65
  • 77.90
  • 76.11
  • 70.75
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000026Segmentation:14-19 somites
2.51e3
  • 2.51e3
  • 5.45e3
  • 5.64e3
  • 6.18e3
  • 7.09e3
  • 8.75e3
  • 8.85e3
  • 9.02e3
  • 9.70e3
  • 1.00e4
91.60
  • 91.60
  • 81.76
  • 81.11
  • 79.31
  • 76.27
  • 70.69
  • 70.36
  • 69.79
  • 67.53
  • 66.53
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
3.06e3
  • 3.06e3
89.77
  • 89.77
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
3.30e3
  • 3.30e3
88.96
  • 88.96
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
3.39e3
  • 3.39e3
88.64
  • 88.64
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000028Segmentation:26+ somites
  • UBERON:0000106zygote stage
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000037Larval:Day 5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000036Larval:Day 4
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000017Gastrula:50%-epiboly
  • UBERON:0000066fully formed stage
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
3.56e3
  • 3.56e3
  • 4.63e3
  • 4.96e3
  • 4.98e3
  • 5.39e3
  • 5.40e3
  • 5.50e3
  • 5.70e3
  • 5.97e3
  • 6.22e3
  • 6.32e3
  • 8.32e3
  • 8.62e3
  • 8.67e3
  • 8.77e3
  • 9.56e3
  • 9.64e3
  • 1.00e4
  • 1.32e4
  • 1.42e4
  • 1.49e4
  • 1.50e4
88.09
  • 88.09
  • 84.51
  • 83.39
  • 83.33
  • 81.96
  • 81.93
  • 81.60
  • 80.92
  • 80.00
  • 79.16
  • 78.83
  • 72.13
  • 71.15
  • 70.96
  • 70.64
  • 67.98
  • 67.72
  • 66.46
  • 55.86
  • 52.43
  • 50.20
  • 49.92
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
3.70e3
  • 3.70e3
  • 4.29e3
  • 4.88e3
  • 5.95e3
  • 6.04e3
87.61
  • 87.61
  • 85.65
  • 83.65
  • 80.07
  • 79.76
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • UBERON:0000109gastrula stage
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
3.70e3
  • 3.70e3
  • 5.04e3
  • 5.19e3
  • 5.52e3
  • 5.69e3
  • 7.04e3
87.61
  • 87.61
  • 83.12
  • 82.63
  • 81.52
  • 80.94
  • 76.43
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
4.22e3
  • 4.22e3
85.88
  • 85.88
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
4.23e3
  • 4.23e3
85.83
  • 85.83
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
4.30e3
  • 4.30e3
85.61
  • 85.61
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
4.30e3
  • 4.30e3
85.59
  • 85.59
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
4.44e3
  • 4.44e3
85.13
  • 85.13
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
4.46e3
  • 4.46e3
85.06
  • 85.06
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
4.63e3
  • 4.63e3
84.49
  • 84.49
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
5.04e3
  • 5.04e3
83.12
  • 83.12
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
5.72e3
  • 5.72e3
80.86
  • 80.86
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
5.99e3
  • 5.99e3
  • 6.54e3
79.96
  • 79.96
  • 78.10
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
6.05e3
  • 6.05e3
  • 6.26e3
79.76
  • 79.76
  • 79.05
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
6.25e3
  • 6.25e3
79.06
  • 79.06
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
6.49e3
  • 6.49e3
78.26
  • 78.26
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
6.49e3
  • 6.49e3
78.25
  • 78.25
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
6.72e3
  • 6.72e3
77.52
  • 77.52
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
6.73e3
  • 6.73e3
77.48
  • 77.48
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
6.74e3
  • 6.74e3
  • 8.02e3
  • 9.03e3
77.42
  • 77.42
  • 73.13
  • 69.75
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
7.12e3
  • 7.12e3
76.16
  • 76.16
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
7.58e3
  • 7.58e3
74.63
  • 74.63
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
7.71e3
  • 7.71e3
  • 8.19e3
74.18
  • 74.18
  • 72.59
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
7.80e3
  • 7.80e3
73.88
  • 73.88
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
8.04e3
  • 8.04e3
  • 8.12e3
73.09
  • 73.09
  • 72.80
AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
8.15e3
  • 8.15e3
72.70
  • 72.70
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.01e4
  • 1.01e4
66.28
  • 66.28
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.14e4
  • 1.14e4
61.87
  • 61.87
AEIR
  • AEIR
UBERON:0001892rhombomere
  • ZFS:0000026Segmentation:14-19 somites
1.17e4
  • 1.17e4
60.70
  • 60.70
AEIR
  • AEIR
UBERON:2007029hindbrain neural keel
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
1.28e4
  • 1.28e4
  • 1.28e4
  • 1.31e4
57.14
  • 57.14
  • 57.14
  • 56.24
AEIR
  • AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EMBLBC075978, CR450773
EnsemblENSDARG00000023591 (nrbf2b)
Uniprot/SPTREMBLQ6DHJ4, Q6DHJ4_DANRE
ZFINZDB-GENE-040718-357 (nrbf2b)

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