D. rerio Gene: sh3gl2 - ENSDARG00000023600 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000023600
Namesh3gl2
DescriptionSH3-domain GRB2-like 2 [Source:ZFIN;Acc:ZDB-GENE-040121-3]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:55616

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
620
  • 620
  • 1.46e3
97.90783
  • 97.90783
  • 95.05774
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000104life cycle
655
  • 655
  • 9.46e3
  • 1.40e4
97.78960
  • 97.78960
  • 68.02334
  • 52.72371
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000031Pharyngula:Prim-25
724
  • 724
  • 6.89e3
  • 9.11e3
  • 1.02e4
97.55615
  • 97.55615
  • 76.72734
  • 69.22062
  • 65.55316
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000037Larval:Day 5
  • ZFS:0000036Larval:Day 4
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000042Juvenile:Days 30-44
  • UBERON:0000106zygote stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000026Segmentation:14-19 somites
  • UBERON:0000066fully formed stage
  • UBERON:0000068embryo stage
1.40e3
  • 1.40e3
  • 2.24e3
  • 4.34e3
  • 6.73e3
  • 6.99e3
  • 7.00e3
  • 1.04e4
  • 1.14e4
  • 1.16e4
  • 1.23e4
  • 1.24e4
  • 1.25e4
  • 1.29e4
  • 1.46e4
  • 1.49e4
95.28186
  • 95.28186
  • 92.43592
  • 85.32091
  • 77.26335
  • 76.37058
  • 76.32748
  • 64.80507
  • 61.53396
  • 60.85900
  • 58.46975
  • 58.04623
  • 57.71718
  • 56.33684
  • 50.68197
  • 49.79382
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
1.50e3
  • 1.50e3
  • 4.03e3
  • 8.68e3
  • 9.71e3
  • 1.11e4
  • 1.12e4
  • 1.31e4
  • 1.42e4
  • 1.43e4
  • 1.43e4
94.92123
  • 94.92123
  • 86.37159
  • 70.65554
  • 67.18953
  • 62.53697
  • 62.19490
  • 55.81035
  • 52.10451
  • 51.75722
  • 51.66556
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
2.91e3
  • 2.91e3
  • 3.12e3
  • 3.46e3
90.17467
  • 90.17467
  • 89.47152
  • 88.32528
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
6.54e3
  • 6.54e3
77.90546
  • 77.90546
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
6.80e3
  • 6.80e3
77.03344
  • 77.03344
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
7.13e3
  • 7.13e3
75.92145
  • 75.92145
AEIR
  • AEIR
UBERON:0001905pineal body
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
7.79e3
  • 7.79e3
  • 9.87e3
  • 1.02e4
  • 1.06e4
  • 1.06e4
  • 1.18e4
  • 1.20e4
  • 1.23e4
73.67069
  • 73.67069
  • 66.65314
  • 65.60979
  • 64.27218
  • 64.26374
  • 59.98310
  • 59.35640
  • 58.31136
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003070trigeminal placode complex
  • ZFS:0000026Segmentation:14-19 somites
8.46e3
  • 8.46e3
71.41842
  • 71.41842
AEIR
  • AEIR
UBERON:0000941cranial nerve II
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
8.88e3
  • 8.88e3
  • 1.48e4
69.99831
  • 69.99831
  • 49.99831
AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
9.05e3
  • 9.05e3
69.42741
  • 69.42741
AEIR
  • AEIR
UBERON:0001714cranial ganglion
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
9.25e3
  • 9.25e3
  • 9.87e3
  • 9.87e3
  • 1.11e4
  • 1.16e4
  • 1.16e4
  • 1.16e4
68.73648
  • 68.73648
  • 66.65314
  • 66.65314
  • 62.48816
  • 60.69907
  • 60.69907
  • 60.69907
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
9.30e3
  • 9.30e3
68.55661
  • 68.55661
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
9.37e3
  • 9.37e3
68.32228
  • 68.32228
AEIR
  • AEIR
UBERON:0001890forebrain
  • ZFS:0000026Segmentation:14-19 somites
9.87e3
  • 9.87e3
66.65314
  • 66.65314
AEIR
  • AEIR
UBERON:0001894diencephalon
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
9.87e3
  • 9.87e3
  • 1.05e4
  • 1.09e4
  • 1.09e4
  • 1.16e4
  • 1.21e4
  • 1.22e4
  • 1.23e4
66.64976
  • 66.64976
  • 64.55799
  • 63.13761
  • 63.01813
  • 60.84251
  • 59.06386
  • 58.80324
  • 58.31136
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001943midbrain tegmentum
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
9.87e3
  • 9.87e3
  • 1.04e4
  • 1.04e4
  • 1.20e4
  • 1.20e4
  • 1.20e4
  • 1.22e4
66.64976
  • 66.64976
  • 64.68900
  • 64.68900
  • 59.35640
  • 59.35640
  • 59.35640
  • 58.80324
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001891midbrain
  • ZFS:0000026Segmentation:14-19 somites
9.87e3
  • 9.87e3
66.64638
  • 66.64638
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000016Blastula:30%-epiboly
9.96e3
  • 9.96e3
  • 1.00e4
  • 1.07e4
66.34272
  • 66.34272
  • 66.07159
  • 64.00183
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001893telencephalon
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
1.01e4
  • 1.01e4
  • 1.01e4
  • 1.05e4
  • 1.07e4
  • 1.15e4
  • 1.20e4
  • 1.25e4
  • 1.25e4
65.77088
  • 65.77088
  • 65.77088
  • 64.55799
  • 63.87031
  • 61.09084
  • 59.35640
  • 57.87109
  • 57.87109
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
1.02e4
  • 1.02e4
65.48566
  • 65.48566
AEIR
  • AEIR
UBERON:0001049neural tube
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
1.03e4
  • 1.03e4
  • 1.04e4
  • 1.11e4
  • 1.11e4
65.19372
  • 65.19372
  • 64.97970
  • 62.47802
  • 62.47802
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002028hindbrain
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
1.04e4
  • 1.04e4
  • 1.06e4
  • 1.06e4
  • 1.11e4
  • 1.16e4
  • 1.18e4
  • 1.18e4
  • 1.25e4
64.97970
  • 64.97970
  • 64.26374
  • 64.25529
  • 62.47802
  • 60.84251
  • 59.97634
  • 59.97634
  • 57.87109
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0010285midbrain basal plate
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
1.04e4
  • 1.04e4
  • 1.04e4
  • 1.04e4
64.68900
  • 64.68900
  • 64.68900
  • 64.68900
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000032Pharyngula:High-pec
1.06e4
  • 1.06e4
  • 1.11e4
  • 1.11e4
  • 1.14e4
  • 1.17e4
  • 1.21e4
  • 1.22e4
64.25529
  • 64.25529
  • 62.47802
  • 62.47802
  • 61.33828
  • 60.50435
  • 59.06386
  • 58.80324
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001017central nervous system
  • ZFS:0000037Larval:Day 5
1.11e4
  • 1.11e4
62.49323
  • 62.49323
AEIR
  • AEIR
UBERON:0004734gastrula
  • UBERON:0000109gastrula stage
  • ZFS:0000022Gastrula:Bud
1.13e4
  • 1.13e4
  • 1.39e4
61.90567
  • 61.90567
  • 53.11838
AEIR
  • AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000021Gastrula:90%-epiboly
1.13e4
  • 1.13e4
  • 1.18e4
  • 1.23e4
61.88109
  • 61.88109
  • 59.97634
  • 58.31136
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:2000058polster
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
1.15e4
  • 1.15e4
  • 1.15e4
  • 1.18e4
61.09084
  • 61.09084
  • 61.09084
  • 59.97634
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
1.17e4
  • 1.17e4
  • 1.19e4
60.30592
  • 60.30592
  • 59.62786
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.18e4
  • 1.18e4
60.02907
  • 60.02907
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.24e4
  • 1.24e4
58.20729
  • 58.20729
AEIR
  • AEIR
UBERON:0003075neural plate
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000023Segmentation:1-4 somites
1.25e4
  • 1.25e4
  • 1.25e4
  • 1.27e4
57.87109
  • 57.87109
  • 57.87109
  • 57.11581
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.26e4
  • 1.26e4
57.36275
  • 57.36275
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.29e4
  • 1.29e4
56.23807
  • 56.23807
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.31e4
  • 1.31e4
55.89205
  • 55.89205
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.37e4
  • 1.37e4
53.82015
  • 53.82015
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
1.38e4
  • 1.38e4
53.36192
  • 53.36192
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
1.45e4
  • 1.45e4
51.00342
  • 51.00342
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.55e4
  • 1.55e4
47.48383
  • 47.48383
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.65e4
  • 1.65e4
44.13944
  • 44.13944
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

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