D. rerio Gene: gabpb1 - ENSDARG00000023659 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000023659
Namegabpb1
DescriptionGA binding protein transcription factor, beta subunit 1 [Source:ZFIN;Acc:ZDB-GENE-061027-46]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:154083

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000066fully formed stage
2.65e3
  • 2.65e3
91.05048
  • 91.05048
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
4.55e3
  • 4.55e3
84.63185
  • 84.63185
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
6.09e3
  • 6.09e3
79.43319
  • 79.43319
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
6.23e3
  • 6.23e3
  • 8.20e3
78.93405
  • 78.93405
  • 72.29142
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
8.08e3
  • 8.08e3
72.70715
  • 72.70715
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
8.84e3
  • 8.84e3
  • 1.33e4
  • 1.44e4
  • 1.45e4
  • 1.46e4
70.11482
  • 70.11482
  • 54.98961
  • 51.17030
  • 50.88368
  • 50.59757
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
9.36e3
  • 9.36e3
68.35405
  • 68.35405
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
1.03e4
  • 1.03e4
65.22291
  • 65.22291
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.04e4
  • 1.04e4
64.75758
  • 64.75758
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.15e4
  • 1.15e4
61.27964
  • 61.27964
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.18e4
  • 1.18e4
60.27242
  • 60.27242
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.18e4
  • 1.18e4
60.24589
  • 60.24589
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.22e4
  • 1.22e4
58.85539
  • 58.85539
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.22e4
  • 1.22e4
58.70414
  • 58.70414
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.34e4
  • 1.34e4
54.65837
  • 54.65837
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.37e4
  • 1.37e4
53.79650
  • 53.79650
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.39e4
  • 1.39e4
53.10361
  • 53.10361
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.60e4
  • 1.60e4
45.91898
  • 45.91898
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLCU611046
EnsemblENSDARG00000023659 (gabpb1)
Uniprot/SPTREMBLF1QYP3, F1QYP3_DANRE
ZFINZDB-GENE-061027-46 (gabpb1)

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