D. rerio Gene: hcrtr2 - ENSDARG00000023722 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000023722
Namehcrtr2
Descriptionhypocretin (orexin) receptor 2 [Source:ZFIN;Acc:ZDB-GENE-070228-3]
OrganismDanio rerio (zebrafish)
Synonym(s)hcrt receptor, hcrtr

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0005569rhombomere 2
  • ZFS:0000033Hatching:Long-pec
7.40e3
  • 7.40e3
74.99998
  • 74.99998
AEIR
  • AEIR
UBERON:2000633caudal tuberculum
  • ZFS:0000033Hatching:Long-pec
1.15e4
  • 1.15e4
61.10267
  • 61.10267
AEIR
  • AEIR
UBERON:0001893telencephalon
  • ZFS:0000033Hatching:Long-pec
1.15e4
  • 1.15e4
61.09084
  • 61.09084
AEIR
  • AEIR
UBERON:0001898hypothalamus
  • ZFS:0000033Hatching:Long-pec
1.16e4
  • 1.16e4
60.69907
  • 60.69907
AEIR
  • AEIR
UBERON:0002240spinal cord
  • ZFS:0000033Hatching:Long-pec
1.17e4
  • 1.17e4
60.50435
  • 60.50435
AEIR
  • AEIR
UBERON:0000007pituitary gland
  • ZFS:0000033Hatching:Long-pec
1.23e4
  • 1.23e4
58.31981
  • 58.31981
AEIR
  • AEIR
UBERON:0001905pineal body
  • ZFS:0000033Hatching:Long-pec
1.25e4
  • 1.25e4
57.87109
  • 57.87109
AEIR
  • AEIR
UBERON:0001891midbrain
  • ZFS:0000033Hatching:Long-pec
1.28e4
  • 1.28e4
56.64807
  • 56.64807
AEIR
  • AEIR
UBERON:0002028hindbrain
  • ZFS:0000033Hatching:Long-pec
1.33e4
  • 1.33e4
54.97294
  • 54.97294
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.44e4
  • 1.44e4
51.25121
  • 51.25121
AEIR
  • AEIR
CL:0005000spinal cord interneuron
  • ZFS:0000033Hatching:Long-pec
1.48e4
  • 1.48e4
50.00000
  • 50.00000
AEIR
  • AEIR
UBERON:0002148locus ceruleus
  • ZFS:0000033Hatching:Long-pec
1.48e4
  • 1.48e4
49.99493
  • 49.99493
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.68e4
  • 1.68e4
43.36171
  • 43.36171
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
2.12e4
  • 2.12e4
  • 2.21e4
  • 2.27e4
28.37274
  • 28.37274
  • 25.38850
  • 23.22661
AEIR
  • AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Cross-references

EMBLCT009597, EF122429
EnsemblENSDARG00000023722 (hcrtr2)
Uniprot/SPTREMBLA1YQE3, A1YQE3_DANRE
ZFINZDB-GENE-070228-3 (hcrtr2)

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