Gene: hcrtr2 - ENSDARG00000023722 - Danio rerio (zebrafish)

General information

Ensembl ID	ENSDARG00000023722
Name	hcrtr2
Description	hypocretin (orexin) receptor 2 [Source:ZFIN;Acc:ZDB-GENE-070228-3]
Organism	Danio rerio (zebrafish)
Synonym(s)	hcrt receptor, hcrtr

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0005569	rhombomere 2	[+] 1 stage ZFS:0000033Hatching:Long-pec	7.40e3 7.40e3	74.99998 74.99998	AEIR AEIR
UBERON:2000633	caudal tuberculum	[+] 1 stage ZFS:0000033Hatching:Long-pec	1.15e4 1.15e4	61.10267 61.10267	AEIR AEIR
UBERON:0001893	telencephalon	[+] 1 stage ZFS:0000033Hatching:Long-pec	1.15e4 1.15e4	61.09084 61.09084	AEIR AEIR
UBERON:0001898	hypothalamus	[+] 1 stage ZFS:0000033Hatching:Long-pec	1.16e4 1.16e4	60.69907 60.69907	AEIR AEIR
UBERON:0002240	spinal cord	[+] 1 stage ZFS:0000033Hatching:Long-pec	1.17e4 1.17e4	60.50435 60.50435	AEIR AEIR
UBERON:0000007	pituitary gland	[+] 1 stage ZFS:0000033Hatching:Long-pec	1.23e4 1.23e4	58.31981 58.31981	AEIR AEIR
UBERON:0001905	pineal body	[+] 1 stage ZFS:0000033Hatching:Long-pec	1.25e4 1.25e4	57.87109 57.87109	AEIR AEIR
UBERON:0001891	midbrain	[+] 1 stage ZFS:0000033Hatching:Long-pec	1.28e4 1.28e4	56.64807 56.64807	AEIR AEIR
UBERON:0002028	hindbrain	[+] 1 stage ZFS:0000033Hatching:Long-pec	1.33e4 1.33e4	54.97294 54.97294	AEIR AEIR
UBERON:0000955	brain	[+] 1 stage UBERON:0000066fully formed stage	1.44e4 1.44e4	51.25121 51.25121	AEIR AEIR
CL:0005000	spinal cord interneuron	[+] 1 stage ZFS:0000033Hatching:Long-pec	1.48e4 1.48e4	50.00000 50.00000	AEIR AEIR
UBERON:0002148	locus ceruleus	[+] 1 stage ZFS:0000033Hatching:Long-pec	1.48e4 1.48e4	49.99493 49.99493	AEIR AEIR
UBERON:0000992	female gonad	[+] 1 stage UBERON:0000066fully formed stage	1.68e4 1.68e4	43.36171 43.36171	AEIR AEIR
UBERON:0000922	embryo	[+] 3 stages UBERON:0000068embryo stage ZFS:0000033Hatching:Long-pec ZFS:0000037Larval:Day 5	2.12e4 2.12e4 2.21e4 2.27e4	28.37274 28.37274 25.38850 23.22661	AEIR AEIR AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

In situ hybridization data: ZFIN
RNA-Seq data: Bgee

Sources of raw data:

In situ hybridization data: ZFIN
RNA-Seq data: GEO

Cross-references

EMBL	CT009597, EF122429
Ensembl	ENSDARG00000023722 (hcrtr2)
Uniprot/SPTREMBL	A1YQE3, A1YQE3_DANRE
ZFIN	ZDB-GENE-070228-3 (hcrtr2)