D. rerio Gene: mfsd4a - ENSDARG00000023768 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000023768
Namemfsd4a
Descriptionmajor facilitator superfamily domain containing 4a [Source:ZFIN;Acc:ZDB-GENE-040426-1643]
OrganismDanio rerio (zebrafish)
Synonym(s)mfsd4, zgc:66461

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
2.15e3
  • 2.15e3
92.72589
  • 92.72589
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
3.65e3
  • 3.65e3
87.65701
  • 87.65701
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
4.14e3
  • 4.14e3
86.00037
  • 86.00037
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
4.48e3
  • 4.48e3
84.85458
  • 84.85458
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000016Blastula:30%-epiboly
5.30e3
  • 5.30e3
  • 5.62e3
  • 6.68e3
82.08754
  • 82.08754
  • 81.01033
  • 77.42514
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • UBERON:0000109gastrula stage
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000022Gastrula:Bud
6.09e3
  • 6.09e3
  • 1.03e4
  • 1.19e4
  • 1.27e4
  • 1.38e4
79.42829
  • 79.42829
  • 65.13511
  • 59.80701
  • 57.03382
  • 53.49419
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
6.78e3
  • 6.78e3
  • 1.01e4
77.10404
  • 77.10404
  • 65.92292
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
7.48e3
  • 7.48e3
74.71144
  • 74.71144
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000036Larval:Day 4
  • ZFS:0000030Pharyngula:Prim-15
7.91e3
  • 7.91e3
  • 8.93e3
  • 1.31e4
  • 1.36e4
  • 1.44e4
  • 1.44e4
  • 1.46e4
  • 1.47e4
  • 1.50e4
  • 1.51e4
  • 1.56e4
  • 1.57e4
  • 1.61e4
73.26387
  • 73.26387
  • 69.83433
  • 55.64635
  • 54.12853
  • 51.43748
  • 51.19384
  • 50.56836
  • 50.29462
  • 49.16928
  • 49.04422
  • 47.18244
  • 46.96602
  • 45.67572
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
7.92e3
  • 7.92e3
73.24117
  • 73.24117
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
8.10e3
  • 8.10e3
72.61927
  • 72.61927
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
8.52e3
  • 8.52e3
71.22336
  • 71.22336
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
9.21e3
  • 9.21e3
68.87466
  • 68.87466
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
9.34e3
  • 9.34e3
68.42141
  • 68.42141
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.03e4
  • 1.03e4
65.02420
  • 65.02420
AEIR
  • AEIR
UBERON:2000088YSL
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
1.09e4
  • 1.09e4
  • 1.09e4
  • 1.09e4
63.31813
  • 63.31813
  • 63.31813
  • 63.31813
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
1.13e4
  • 1.13e4
  • 1.18e4
  • 1.22e4
  • 1.23e4
  • 1.23e4
61.88109
  • 61.88109
  • 59.97634
  • 58.80324
  • 58.31136
  • 58.31136
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001894diencephalon
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000031Pharyngula:Prim-25
1.17e4
  • 1.17e4
  • 1.22e4
  • 1.22e4
  • 1.23e4
  • 1.25e4
  • 1.29e4
  • 1.32e4
  • 1.35e4
60.38795
  • 60.38795
  • 58.80324
  • 58.66693
  • 58.31136
  • 57.87109
  • 56.49131
  • 55.53188
  • 54.51503
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.41e4
  • 1.41e4
52.29597
  • 52.29597
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.43e4
  • 1.43e4
51.67729
  • 51.67729
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
1.52e4
  • 1.52e4
  • 1.74e4
48.73385
  • 48.73385
  • 41.35329
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
1.74e4
  • 1.74e4
  • 1.77e4
  • 1.81e4
  • 1.97e4
  • 2.09e4
  • 2.27e4
41.16749
  • 41.16749
  • 40.27188
  • 38.98481
  • 33.57954
  • 29.28194
  • 23.32652
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.87e4
  • 1.87e4
  • 2.00e4
36.64337
  • 36.64337
  • 32.50976
AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.89e4
  • 1.89e4
35.97418
  • 35.97418
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EnsemblENSDARG00000023768 (mfsd4a)
Uniprot/SPTREMBLF1QNN3, F1QNN3_DANRE
ZFINZDB-GENE-040426-1643 (mfsd4a)

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