D. rerio Gene: AKAP13 (1 to many) - ENSDARG00000023868 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000023868
NameAKAP13 (1 to many)
Descriptionsi:dkey-172h23.2 [Source:ZFIN;Acc:ZDB-GENE-141212-258]
OrganismDanio rerio (zebrafish)
Synonym(s)akap-lbc, arhgef13, brx, c-lbc, ha-3, ht31, lbc, proto-lb, zgc:73349

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000948heart
  • UBERON:0000066fully formed stage
6.60e3
  • 6.60e3
77.70768
  • 77.70768
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
7.29e3
  • 7.29e3
75.35700
  • 75.35700
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
9.56e3
  • 9.56e3
67.67783
  • 67.67783
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
9.73e3
  • 9.73e3
67.12690
  • 67.12690
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.08e4
  • 1.08e4
63.57460
  • 63.57460
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.12e4
  • 1.12e4
62.14152
  • 62.14152
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.14e4
  • 1.14e4
61.44187
  • 61.44187
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.15e4
  • 1.15e4
61.11402
  • 61.11402
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.15e4
  • 1.15e4
  • 1.15e4
60.99526
  • 60.99526
  • 60.97882
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.20e4
  • 1.20e4
59.57846
  • 59.57846
AEIR
  • AEIR
UBERON:0000004nose
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
1.31e4
  • 1.31e4
  • 1.31e4
  • 1.39e4
  • 1.39e4
55.86038
  • 55.86038
  • 55.86038
  • 53.10304
  • 52.91751
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.32e4
  • 1.32e4
55.55544
  • 55.55544
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
1.43e4
  • 1.43e4
  • 1.54e4
  • 1.57e4
  • 1.65e4
  • 1.75e4
51.75164
  • 51.75164
  • 48.02751
  • 46.82568
  • 44.14976
  • 40.83450
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.49e4
  • 1.49e4
49.79129
  • 49.79129
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.69e4
  • 1.69e4
42.73652
  • 42.73652
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.76e4
  • 1.76e4
40.54930
  • 40.54930
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • EST data: UniGene
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Cross-references

EMBLCR848709
EnsemblENSDARG00000023868 (AKAP13 (1 to many))
HGNCHGNC:371 (AKAP13 (1 to many))
Uniprot/SPTREMBLF1R7S0, F1R7S0_DANRE, F1RB67, F1RB67_DANRE
ZFINZDB-GENE-141212-258 (si:dkey-172h23.2)

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