Gene: llgl2 - ENSDARG00000023920 - Danio rerio (zebrafish)

General information

Ensembl ID	ENSDARG00000023920
Name	llgl2
Description	lethal giant larvae homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-9877]
Organism	Danio rerio (zebrafish)
Synonym(s)	cb521, lgl2, llglh2, pen, penner, sb:cb521, wu:fc06g08, wu:fl37c09, zgc:55895

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0007010	cleaving embryo	[+] 1 stage ZFS:0000005Cleavage:16-cell	508 508	98.28570 98.28570	AEIR AEIR
UBERON:0000468	multi-cellular organism	[+] 19 stages UBERON:0000106zygote stage ZFS:0000019Gastrula:Shield ZFS:0000020Gastrula:75%-epiboly ZFS:0000022Gastrula:Bud ZFS:0000021Gastrula:90%-epiboly ZFS:0000040Larval:Days 14-20 ZFS:0000029Pharyngula:Prim-5 ZFS:0000026Segmentation:14-19 somites ZFS:0000024Segmentation:5-9 somites ZFS:0000028Segmentation:26+ somites ZFS:0000036Larval:Day 4 ZFS:0000030Pharyngula:Prim-15 ZFS:0000042Juvenile:Days 30-44 ZFS:0000033Hatching:Long-pec ZFS:0000037Larval:Day 5 UBERON:00072322 cell stage UBERON:0000104life cycle UBERON:0000066fully formed stage UBERON:0000068embryo stage	1.04e3 1.04e3 1.13e3 3.05e3 3.38e3 3.47e3 3.71e3 3.94e3 4.05e3 4.16e3 4.23e3 4.33e3 4.61e3 4.64e3 5.24e3 5.99e3 6.73e3 1.42e4 1.43e4 1.45e4	96.47995 96.47995 96.17994 89.69989 88.57503 88.26359 87.47203 86.68962 86.30300 85.95728 85.71477 85.35662 84.42365 84.32380 82.29460 79.76888 77.26767 51.88136 51.55493 51.00857	AEIR AEIR AEIR AEIR AEIR AEIR AEIR AEIR AEIR AEIR AEIR AEIR AEIR AEIR AEIR AEIR AEIR AEIR AEIR AEIR
UBERON:0000206	pharyngeal gill	[+] 1 stage UBERON:0000066fully formed stage	1.52e3 1.52e3	94.88280 94.88280	AEIR AEIR
UBERON:0004734	gastrula	[+] 5 stages ZFS:0000017Gastrula:50%-epiboly UBERON:0000109gastrula stage ZFS:0000021Gastrula:90%-epiboly ZFS:0000020Gastrula:75%-epiboly ZFS:0000022Gastrula:Bud	1.91e3 1.91e3 2.58e3 3.30e3 4.31e3 5.66e3	93.53746 93.53746 91.28133 88.85559 85.44346 80.85880	AEIR AEIR AEIR AEIR AEIR AEIR
UBERON:0000307	blastula	[+] 3 stages ZFS:0000016Blastula:30%-epiboly ZFS:0000014Blastula:Sphere ZFS:0000009Blastula:256-cell	2.21e3 2.21e3 2.91e3 3.46e3	92.54863 92.54863 90.16744 88.31819	AEIR AEIR AEIR AEIR
UBERON:0000970	eye	[+] 1 stage ZFS:0000031Pharyngula:Prim-25	2.24e3 2.24e3	92.41830 92.41830	AEIR AEIR
UBERON:0000160	intestine	[+] 1 stage UBERON:0000066fully formed stage	2.27e3 2.27e3	92.32758 92.32758	AEIR AEIR
UBERON:0002415	tail	[+] 1 stage UBERON:0000066fully formed stage	2.43e3 2.43e3	91.77665 91.77665	AEIR AEIR
UBERON:2000001	Kupffer's vesicle	[+] 4 stages ZFS:0000023Segmentation:1-4 somites ZFS:0000024Segmentation:5-9 somites ZFS:0000025Segmentation:10-13 somites ZFS:0000026Segmentation:14-19 somites	2.47e3 2.47e3 4.55e3 4.55e3 1.11e4	91.66667 91.66667 84.61200 84.61200 62.49323	AEIR AEIR AEIR AEIR AEIR
UBERON:0002113	kidney	[+] 1 stage UBERON:0000066fully formed stage	2.95e3 2.95e3	90.04614 90.04614	AEIR AEIR
UBERON:4000164	caudal fin	[+] 2 stages UBERON:0000066fully formed stage ZFS:0000033Hatching:Long-pec	3.01e3 3.01e3 3.19e3	89.83504 89.83504 89.22577	AEIR AEIR AEIR
UBERON:0000922	embryo	[+] 10 stages UBERON:0000068embryo stage UBERON:0004707pharyngula stage ZFS:0000026Segmentation:14-19 somites ZFS:0000025Segmentation:10-13 somites ZFS:0000029Pharyngula:Prim-5 ZFS:0000024Segmentation:5-9 somites ZFS:0000037Larval:Day 5 ZFS:0000033Hatching:Long-pec ZFS:0000030Pharyngula:Prim-15 ZFS:0000031Pharyngula:Prim-25	3.09e3 3.09e3 3.12e3 3.69e3 3.73e3 3.88e3 4.00e3 4.15e3 4.25e3 5.27e3 8.28e3	89.56281 89.56281 89.45803 87.52485 87.38259 86.88433 86.47346 85.99162 85.64343 82.17464 72.00838	AEIR AEIR AEIR AEIR AEIR AEIR AEIR AEIR AEIR AEIR AEIR
UBERON:0000033	head	[+] 2 stages UBERON:0000066fully formed stage ZFS:0000037Larval:Day 5	3.16e3 3.16e3 5.28e3	89.33973 89.33973 82.14902	AEIR AEIR AEIR
UBERON:0007132	head kidney	[+] 1 stage UBERON:0000066fully formed stage	3.25e3 3.25e3	89.03554 89.03554	AEIR AEIR
UBERON:0000014	zone of skin	[+] 1 stage UBERON:0000066fully formed stage	3.32e3 3.32e3	88.78255 88.78255	AEIR AEIR
UBERON:0002106	spleen	[+] 1 stage UBERON:0000066fully formed stage	3.95e3 3.95e3	86.64256 86.64256	AEIR AEIR
UBERON:0000948	heart	[+] 1 stage UBERON:0000066fully formed stage	3.96e3 3.96e3	86.61851 86.61851	AEIR AEIR
UBERON:0007383	enveloping layer of ectoderm	[+] 6 stages ZFS:0000020Gastrula:75%-epiboly ZFS:0000017Gastrula:50%-epiboly ZFS:0000018Gastrula:Germ-ring ZFS:0000021Gastrula:90%-epiboly ZFS:0000022Gastrula:Bud ZFS:0000019Gastrula:Shield	4.04e3 4.04e3 5.38e3 5.92e3 5.92e3 5.92e3 6.17e3	86.36196 86.36196 81.81481 79.99662 79.99662 79.99662 79.16161	AEIR AEIR AEIR AEIR AEIR AEIR AEIR
UBERON:0003982	mature ovarian follicle	[+] 1 stage UBERON:0000066fully formed stage	4.38e3 4.38e3	85.20947 85.20947	AEIR AEIR
UBERON:0002107	liver	[+] 1 stage UBERON:0000066fully formed stage	4.59e3 4.59e3	84.47741 84.47741	AEIR AEIR
UBERON:0002548	larva	[+] 3 stages UBERON:0000069larval stage ZFS:0000035Larval:Protruding-mouth ZFS:0000037Larval:Day 5	4.60e3 4.60e3 5.80e3 6.51e3	84.44355 84.44355 80.41489 78.00923	AEIR AEIR AEIR AEIR
UBERON:0002082	cardiac ventricle	[+] 1 stage UBERON:0000066fully formed stage	5.28e3 5.28e3	82.16508 82.16508	AEIR AEIR
UBERON:0002481	bone tissue	[+] 1 stage UBERON:0000066fully formed stage	5.43e3 5.43e3	81.63690 81.63690	AEIR AEIR
UBERON:0009620	tail bud paraxial mesoderm	[+] 1 stage ZFS:0000027Segmentation:20-25 somites	5.49e3 5.49e3	81.45688 81.45688	AEIR AEIR
UBERON:0000955	brain	[+] 2 stages ZFS:0000031Pharyngula:Prim-25 UBERON:0000066fully formed stage	5.60e3 5.60e3 1.02e4	81.06789 81.06789 65.63488	AEIR AEIR AEIR
UBERON:0002385	muscle tissue	[+] 1 stage UBERON:0000066fully formed stage	5.78e3 5.78e3	80.46406 80.46406	AEIR AEIR
UBERON:2000058	polster	[+] 3 stages ZFS:0000023Segmentation:1-4 somites ZFS:0000025Segmentation:10-13 somites ZFS:0000024Segmentation:5-9 somites	6.58e3 6.58e3 6.58e3 7.40e3	77.76763 77.76763 77.76763 74.98646	AEIR AEIR AEIR AEIR
UBERON:0003059	presomitic mesoderm	[+] 1 stage ZFS:0000025Segmentation:10-13 somites	6.98e3 6.98e3	76.41226 76.41226	AEIR AEIR
UBERON:0003069	otic placode	[+] 4 stages ZFS:0000026Segmentation:14-19 somites ZFS:0000025Segmentation:10-13 somites ZFS:0000023Segmentation:1-4 somites ZFS:0000024Segmentation:5-9 somites	7.01e3 7.01e3 1.11e4 1.14e4 1.21e4	76.30396 76.30396 62.48816 61.52495 59.07907	AEIR AEIR AEIR AEIR AEIR
UBERON:0002329	somite	[+] 1 stage ZFS:0000025Segmentation:10-13 somites	7.16e3 7.16e3	75.79715 75.79715	AEIR AEIR
UBERON:0000966	retina	[+] 3 stages UBERON:0000066fully formed stage ZFS:0000031Pharyngula:Prim-25 ZFS:0000033Hatching:Long-pec	7.35e3 7.35e3 7.80e3 8.06e3	75.15293 75.15293 73.63374 72.75812	AEIR AEIR AEIR AEIR
UBERON:0003058	hypochord	[+] 3 stages ZFS:0000029Pharyngula:Prim-5 ZFS:0000028Segmentation:26+ somites ZFS:0000027Segmentation:20-25 somites	7.40e3 7.40e3 7.97e3 8.63e3	74.99153 74.99153 73.06846 70.82487	AEIR AEIR AEIR AEIR
ZFA:0000003	adaxial cell (Danio)	[+] 1 stage ZFS:0000026Segmentation:14-19 somites	7.40e3 7.40e3	74.98984 74.98984	AEIR AEIR
ZFA:0000023	forerunner cell group (Danio)	[+] 6 stages ZFS:0000020Gastrula:75%-epiboly ZFS:0000019Gastrula:Shield ZFS:0000021Gastrula:90%-epiboly ZFS:0000017Gastrula:50%-epiboly ZFS:0000018Gastrula:Germ-ring ZFS:0000022Gastrula:Bud	7.40e3 7.40e3 7.97e3 7.97e3 8.07e3 8.07e3 8.46e3	74.98984 74.98984 73.06846 73.06846 72.72050 72.72050 71.41842	AEIR AEIR AEIR AEIR AEIR AEIR AEIR
UBERON:0003060	pronephric duct	[+] 6 stages ZFS:0000029Pharyngula:Prim-5 ZFS:0000027Segmentation:20-25 somites ZFS:0000026Segmentation:14-19 somites ZFS:0000028Segmentation:26+ somites ZFS:0000030Pharyngula:Prim-15 ZFS:0000031Pharyngula:Prim-25	7.40e3 7.40e3 8.88e3 9.05e3 9.35e3 1.11e4 1.11e4	74.98646 74.98646 69.98310 69.42923 68.40414 62.48309 62.48309	AEIR AEIR AEIR AEIR AEIR AEIR AEIR
UBERON:0003051	ear vesicle	[+] 7 stages ZFS:0000027Segmentation:20-25 somites ZFS:0000029Pharyngula:Prim-5 ZFS:0000028Segmentation:26+ somites ZFS:0000032Pharyngula:High-pec ZFS:0000030Pharyngula:Prim-15 ZFS:0000033Hatching:Long-pec ZFS:0000031Pharyngula:Prim-25	7.72e3 7.72e3 8.39e3 9.16e3 9.35e3 9.62e3 9.62e3 1.01e4	73.89614 73.89614 71.64132 69.02902 68.40414 67.48142 67.48142 65.88711	AEIR AEIR AEIR AEIR AEIR AEIR AEIR AEIR
UBERON:0001638	vein	[+] 3 stages ZFS:0000027Segmentation:20-25 somites ZFS:0000028Segmentation:26+ somites ZFS:0000029Pharyngula:Prim-5	7.97e3 7.97e3 7.97e3 8.88e3	73.06846 73.06846 73.06846 69.98817	AEIR AEIR AEIR AEIR
UBERON:0003050	olfactory placode	[+] 4 stages ZFS:0000029Pharyngula:Prim-5 ZFS:0000026Segmentation:14-19 somites ZFS:0000027Segmentation:20-25 somites ZFS:0000028Segmentation:26+ somites	8.14e3 8.14e3 8.33e3 9.05e3 9.05e3	72.48478 72.48478 71.86318 69.42923 69.42923	AEIR AEIR AEIR AEIR AEIR
UBERON:0003055	periderm	[+] 6 stages ZFS:0000017Gastrula:50%-epiboly ZFS:0000018Gastrula:Germ-ring ZFS:0000019Gastrula:Shield ZFS:0000020Gastrula:75%-epiboly ZFS:0000021Gastrula:90%-epiboly ZFS:0000022Gastrula:Bud	8.46e3 8.46e3 8.46e3 8.46e3 8.46e3 8.46e3 8.46e3	71.42518 71.42518 71.42518 71.42518 71.42518 71.42518 71.42518	AEIR AEIR AEIR AEIR AEIR AEIR AEIR
UBERON:0002540	lateral line system	[+] 5 stages ZFS:0000027Segmentation:20-25 somites ZFS:0000028Segmentation:26+ somites ZFS:0000029Pharyngula:Prim-5 ZFS:0000032Pharyngula:High-pec ZFS:0000033Hatching:Long-pec	9.05e3 9.05e3 9.05e3 9.05e3 1.11e4 1.11e4	69.42923 69.42923 69.42923 69.42923 62.48816 62.48816	AEIR AEIR AEIR AEIR AEIR AEIR
UBERON:0000473	testis	[+] 1 stage UBERON:0000066fully formed stage	9.12e3 9.12e3	69.18899 69.18899	AEIR AEIR
UBERON:0000004	nose	[+] 4 stages ZFS:0000033Hatching:Long-pec ZFS:0000032Pharyngula:High-pec ZFS:0000030Pharyngula:Prim-15 ZFS:0000031Pharyngula:Prim-25	9.25e3 9.25e3 9.58e3 1.13e4 1.13e4	68.73648 68.73648 67.63186 61.74610 61.74610	AEIR AEIR AEIR AEIR AEIR
UBERON:0002037	cerebellum	[+] 2 stages ZFS:0000033Hatching:Long-pec ZFS:0000032Pharyngula:High-pec	1.06e4 1.06e4 1.21e4	64.27218 64.27218 59.07907	AEIR AEIR AEIR
UBERON:0001555	digestive tract	[+] 3 stages ZFS:0000029Pharyngula:Prim-5 ZFS:0000030Pharyngula:Prim-15 ZFS:0000031Pharyngula:Prim-25	1.09e4 1.09e4 1.14e4 1.16e4	63.31813 63.31813 61.52495 60.69907	AEIR AEIR AEIR AEIR
UBERON:0001042	chordate pharynx	[+] 2 stages ZFS:0000033Hatching:Long-pec ZFS:0000032Pharyngula:High-pec	1.11e4 1.11e4 1.15e4	62.47802 62.47802 61.09084	AEIR AEIR AEIR
UBERON:2001157	posterior lateral line primordium	[+] 2 stages ZFS:0000029Pharyngula:Prim-5 ZFS:0000030Pharyngula:Prim-15	1.23e4 1.23e4 1.35e4	58.32826 58.32826 54.53193	AEIR AEIR AEIR
UBERON:0001003	skin epidermis	[+] 1 stage ZFS:0000029Pharyngula:Prim-5	1.27e4 1.27e4	57.11581 57.11581	AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

Affymetrix data: Bgee
EST data: Bgee
In situ hybridization data: ZFIN
RNA-Seq data: Bgee

Sources of raw data:

Affymetrix data: ArrayExpress, GEO
EST data: UniGene
In situ hybridization data: ZFIN
RNA-Seq data: GEO

Cross-references

EMBL	BC052919, BC171635, CR405682, CU462818, FQ312018
Ensembl	ENSDARG00000023920 (llgl2)
Uniprot/SPTREMBL	B7ZVM2, B7ZVM2_DANRE, G1K2W2, G1K2W2_DANRE
Uniprot/SWISSPROT	L2GL2_DANRE, Q7SZE3
ZFIN	ZDB-GENE-030131-9877 (llgl2)