D. rerio Gene: dctn4 - ENSDARG00000023988 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000023988
Namedctn4
Descriptiondynactin 4 [Source:ZFIN;Acc:ZDB-GENE-050417-306]
OrganismDanio rerio (zebrafish)
Synonym(s)si:ch211-174h24.2, zgc:112431

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
1.01e3
  • 1.01e3
  • 3.04e3
  • 3.94e3
  • 4.16e3
96.63
  • 96.63
  • 89.82
  • 86.79
  • 86.08
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
2.11e3
  • 2.11e3
92.93
  • 92.93
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
2.14e3
  • 2.14e3
  • 6.83e3
92.83
  • 92.83
  • 77.14
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.64e3
  • 2.64e3
91.16
  • 91.16
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000024Segmentation:5-9 somites
2.66e3
  • 2.66e3
  • 3.93e3
  • 4.57e3
  • 4.67e3
  • 6.24e3
  • 6.39e3
  • 6.55e3
  • 6.64e3
  • 6.98e3
  • 8.70e3
91.08
  • 91.08
  • 86.85
  • 84.71
  • 84.35
  • 79.10
  • 78.59
  • 78.08
  • 77.77
  • 76.65
  • 70.88
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
2.97e3
  • 2.97e3
  • 5.38e3
90.05
  • 90.05
  • 81.98
AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
3.44e3
  • 3.44e3
88.47
  • 88.47
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
3.61e3
  • 3.61e3
87.90
  • 87.90
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
3.66e3
  • 3.66e3
87.74
  • 87.74
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
3.95e3
  • 3.95e3
  • 4.74e3
86.78
  • 86.78
  • 84.12
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
3.96e3
  • 3.96e3
86.73
  • 86.73
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
4.08e3
  • 4.08e3
  • 5.17e3
  • 6.77e3
  • 8.18e3
  • 8.40e3
86.34
  • 86.34
  • 82.69
  • 77.33
  • 72.60
  • 71.86
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
4.18e3
  • 4.18e3
86.02
  • 86.02
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
4.20e3
  • 4.20e3
85.96
  • 85.96
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
4.25e3
  • 4.25e3
85.76
  • 85.76
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
4.27e3
  • 4.27e3
85.72
  • 85.72
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
4.37e3
  • 4.37e3
85.36
  • 85.36
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
4.49e3
  • 4.49e3
84.96
  • 84.96
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
4.54e3
  • 4.54e3
84.81
  • 84.81
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
4.75e3
  • 4.75e3
84.09
  • 84.09
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
4.90e3
  • 4.90e3
83.59
  • 83.59
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000023Segmentation:1-4 somites
  • UBERON:0004707pharyngula stage
  • UBERON:00072322 cell stage
  • UBERON:00072334 cell stage
  • UBERON:00072368 cell stage
  • ZFS:0000006Cleavage:32-cell
  • ZFS:0000007Cleavage:64-cell
  • ZFS:0000008Blastula:128-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000010Blastula:512-cell
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000012Blastula:High
  • ZFS:0000013Blastula:Oblong
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000005Cleavage:16-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000037Larval:Day 5
  • ZFS:0000017Gastrula:50%-epiboly
  • UBERON:0000106zygote stage
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000036Larval:Day 4
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
4.98e3
  • 4.98e3
  • 6.54e3
  • 6.64e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.97e3
  • 7.03e3
  • 7.47e3
  • 7.47e3
  • 7.75e3
  • 7.91e3
  • 8.59e3
  • 8.74e3
  • 8.78e3
  • 8.90e3
  • 8.96e3
  • 8.96e3
  • 9.25e3
  • 9.54e3
  • 9.61e3
  • 9.62e3
  • 9.66e3
  • 1.02e4
  • 1.06e4
  • 1.07e4
  • 1.12e4
83.33
  • 83.33
  • 78.12
  • 77.77
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 76.66
  • 76.46
  • 74.99
  • 74.99
  • 74.06
  • 73.52
  • 71.22
  • 70.73
  • 70.60
  • 70.20
  • 69.99
  • 69.99
  • 69.04
  • 68.06
  • 67.84
  • 67.78
  • 67.64
  • 65.91
  • 64.53
  • 64.13
  • 62.53
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
5.17e3
  • 5.17e3
82.71
  • 82.71
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000109gastrula stage
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
5.31e3
  • 5.31e3
  • 6.16e3
  • 8.62e3
  • 8.98e3
  • 9.30e3
  • 9.86e3
82.23
  • 82.23
  • 79.37
  • 71.15
  • 69.92
  • 68.87
  • 66.97
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
6.08e3
  • 6.08e3
79.66
  • 79.66
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000037Larval:Day 5
6.96e3
  • 6.96e3
  • 9.87e3
  • 1.06e4
76.70
  • 76.70
  • 66.94
  • 64.48
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
6.98e3
  • 6.98e3
76.62
  • 76.62
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
7.36e3
  • 7.36e3
75.37
  • 75.37
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
7.83e3
  • 7.83e3
73.78
  • 73.78
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
8.97e3
  • 8.97e3
69.97
  • 69.97
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.16e4
  • 1.16e4
61.21
  • 61.21
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EMBLCT997810
EnsemblENSDARG00000023988 (dctn4)
Uniprot/SPTREMBLF1R222, F1R222_DANRE
ZFINZDB-GENE-050417-306 (dctn4)

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