D. rerio Gene: gnpda2 - ENSDARG00000024443 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000024443
Namegnpda2
Descriptionglucosamine-6-phosphate deaminase 2 [Source:ZFIN;Acc:ZDB-GENE-091117-41]
OrganismDanio rerio (zebrafish)
Synonym(s)si:dkey-185e18.2

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
2.02e3
  • 2.02e3
  • 2.31e3
  • 3.14e3
  • 3.64e3
  • 3.75e3
  • 4.01e3
  • 4.12e3
  • 4.41e3
  • 6.05e3
  • 8.35e3
93.23
  • 93.23
  • 92.27
  • 89.48
  • 87.80
  • 87.43
  • 86.58
  • 86.19
  • 85.23
  • 79.73
  • 72.04
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
2.10e3
  • 2.10e3
92.99
  • 92.99
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
2.14e3
  • 2.14e3
92.84
  • 92.84
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • UBERON:0000109gastrula stage
2.30e3
  • 2.30e3
  • 2.89e3
  • 5.33e3
  • 5.94e3
  • 6.02e3
  • 8.95e3
92.29
  • 92.29
  • 90.31
  • 82.17
  • 80.12
  • 79.84
  • 70.05
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
3.50e3
  • 3.50e3
  • 4.81e3
  • 8.56e3
  • 1.03e4
  • 1.07e4
88.28
  • 88.28
  • 83.89
  • 71.34
  • 65.61
  • 64.33
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
3.61e3
  • 3.61e3
87.92
  • 87.92
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
3.79e3
  • 3.79e3
87.33
  • 87.33
AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
4.70e3
  • 4.70e3
84.27
  • 84.27
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000106zygote stage
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000036Larval:Day 4
  • ZFS:0000037Larval:Day 5
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000042Juvenile:Days 30-44
5.15e3
  • 5.15e3
  • 5.76e3
  • 5.86e3
  • 6.97e3
  • 6.99e3
  • 7.04e3
  • 7.53e3
  • 7.64e3
  • 8.40e3
  • 1.02e4
  • 1.08e4
  • 1.17e4
  • 1.25e4
  • 1.30e4
82.76
  • 82.76
  • 80.72
  • 80.39
  • 76.68
  • 76.60
  • 76.43
  • 74.80
  • 74.44
  • 71.89
  • 65.98
  • 63.88
  • 60.74
  • 58.26
  • 56.64
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
5.46e3
  • 5.46e3
  • 8.72e3
  • 8.95e3
81.72
  • 81.72
  • 70.81
  • 70.04
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
6.03e3
  • 6.03e3
79.82
  • 79.82
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
6.10e3
  • 6.10e3
79.59
  • 79.59
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
6.12e3
  • 6.12e3
  • 7.98e3
79.52
  • 79.52
  • 73.29
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
6.57e3
  • 6.57e3
78.00
  • 78.00
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
6.62e3
  • 6.62e3
77.82
  • 77.82
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
6.67e3
  • 6.67e3
  • 8.80e3
77.66
  • 77.66
  • 70.54
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
7.17e3
  • 7.17e3
76.01
  • 76.01
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
8.09e3
  • 8.09e3
72.90
  • 72.90
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
8.30e3
  • 8.30e3
72.20
  • 72.20
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
8.49e3
  • 8.49e3
71.57
  • 71.57
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
8.57e3
  • 8.57e3
  • 9.78e3
71.31
  • 71.31
  • 67.25
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
8.73e3
  • 8.73e3
  • 9.12e3
  • 1.14e4
  • 1.35e4
70.76
  • 70.76
  • 69.45
  • 61.78
  • 54.66
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
8.81e3
  • 8.81e3
  • 8.95e3
70.50
  • 70.50
  • 70.04
AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
9.53e3
  • 9.53e3
68.08
  • 68.08
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
9.85e3
  • 9.85e3
67.02
  • 67.02
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.07e4
  • 1.07e4
64.29
  • 64.29
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.09e4
  • 1.09e4
63.39
  • 63.39
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.13e4
  • 1.13e4
62.17
  • 62.17
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.16e4
  • 1.16e4
61.10
  • 61.10
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.19e4
  • 1.19e4
60.25
  • 60.25
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EMBLBX088718
EnsemblENSDARG00000024443 (gnpda2)
Uniprot/SPTREMBLE7F0E2, E7F0E2_DANRE
ZFINZDB-GENE-091117-41 (gnpda2)

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