D. rerio Gene: slc4a1b - ENSDARG00000024560 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000024560
Nameslc4a1b
Descriptionsolute carrier family 4 (anion exchanger), member 1b (Diego blood group) [Source:ZFIN;Acc:ZDB-GENE-110215-2]
OrganismDanio rerio (zebrafish)
Synonym(s)pers, zae1b
Paralog(s)3 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
4.35e3
  • 4.35e3
85.45
  • 85.45
AEIR
  • AEIR
CL:0005006ionocyte
  • ZFS:0000035Larval:Protruding-mouth
7.47e3
  • 7.47e3
75.00
  • 75.00
AEIR
  • AEIR
UBERON:0008896post-hyoid pharyngeal arch
  • ZFS:0000036Larval:Day 4
  • ZFS:0000037Larval:Day 5
7.47e3
  • 7.47e3
  • 1.49e4
75.00
  • 75.00
  • 50.00
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
8.77e3
  • 8.77e3
  • 2.38e4
70.63
  • 70.63
  • 20.18
AEIR
  • AEIR
  • AEIR
UBERON:2000006ball
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000036Larval:Day 4
  • ZFS:0000029Pharyngula:Prim-5
9.96e3
  • 9.96e3
  • 9.96e3
  • 1.49e4
  • 1.49e4
66.67
  • 66.67
  • 66.67
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
1.23e4
  • 1.23e4
  • 1.39e4
  • 1.40e4
  • 1.59e4
  • 1.66e4
58.88
  • 58.88
  • 53.44
  • 53.21
  • 46.92
  • 44.51
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0008904neuromast
  • ZFS:0000035Larval:Protruding-mouth
1.28e4
  • 1.28e4
57.14
  • 57.14
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.30e4
  • 1.30e4
56.38
  • 56.38
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.35e4
  • 1.35e4
  • 1.35e4
54.65
  • 54.65
  • 54.65
AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
1.41e4
  • 1.41e4
52.66
  • 52.66
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
1.49e4
  • 1.49e4
50.11
  • 50.11
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
1.71e4
  • 1.71e4
42.77
  • 42.77
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Metazoa3 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000024560.

Cross-references

EnsemblENSDARG00000024560 (slc4a1b)
ZFINZDB-GENE-110215-2 (slc4a1b)
EMBLBX547998, BX928755, FJ211592
Uniprot/SPTREMBLD1FTM8, D1FTM8_DANRE, F8W2B8, F8W2B8_DANRE

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