D. rerio Gene: slc24a5 - ENSDARG00000024771 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000024771
Nameslc24a5
Descriptionsolute carrier family 24 (sodium/potassium/calcium exchanger), member 5 [Source:ZFIN;Acc:ZDB-GENE-031210-1]
OrganismDanio rerio (zebrafish)
Synonym(s)gol, gol-1, golden, golden-1

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
8.63e3
  • 8.63e3
  • 1.12e4
  • 1.33e4
  • 1.37e4
  • 1.76e4
71.12
  • 71.12
  • 62.37
  • 55.53
  • 54.02
  • 41.11
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
9.41e3
  • 9.41e3
68.51
  • 68.51
AEIR
  • AEIR
CL:0000148melanocyte
  • ZFS:0000029Pharyngula:Prim-5
9.96e3
  • 9.96e3
66.67
  • 66.67
AEIR
  • AEIR
UBERON:0005424presumptive retinal pigmented epithelium
  • ZFS:0000029Pharyngula:Prim-5
1.12e4
  • 1.12e4
62.50
  • 62.50
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.34e4
  • 1.34e4
  • 1.83e4
55.16
  • 55.16
  • 38.77
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.39e4
  • 1.39e4
53.59
  • 53.59
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.88e4
  • 1.88e4
  • 2.35e4
37.13
  • 37.13
  • 21.16
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.90e4
  • 1.90e4
36.22
  • 36.22
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
2.10e4
  • 2.10e4
29.78
  • 29.78
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Cross-references

EMBLCU457753
EnsemblENSDARG00000024771 (slc24a5)
Uniprot/SPTREMBLB0V3S7, B0V3S7_DANRE
ZFINZDB-GENE-031210-1 (slc24a5)

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