Gene: rilpl2 - ENSDARG00000024818 - Danio rerio (zebrafish)

General information

Ensembl ID	ENSDARG00000024818
Name	rilpl2
Description	Rab interacting lysosomal protein-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6682]
Organism	Danio rerio (zebrafish)
Synonym(s)	a5wux4, fa02e07, wu:fa02e07, zgc:162589
Orthologs(s)	18 orthologs

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0000468	multi-cellular organism	[+] 4 stages ZFS:0000028Segmentation:26+ somites UBERON:0000104life cycle UBERON:0000066fully formed stage UBERON:0000068embryo stage	3.56e3 3.56e3 1.50e4 1.50e4 1.50e4	88.10 88.10 49.92 49.81 49.80	AEIR AEIR AEIR AEIR AEIR
UBERON:0006860	swim bladder	[+] 1 stage UBERON:0000066fully formed stage	4.19e3 4.19e3	85.97 85.97	AEIR AEIR
UBERON:0000473	testis	[+] 1 stage UBERON:0000066fully formed stage	4.29e3 4.29e3	85.65 85.65	AEIR AEIR
UBERON:0000992	female gonad	[+] 1 stage UBERON:0000066fully formed stage	5.44e3 5.44e3	81.77 81.77	AEIR AEIR
UBERON:0000206	pharyngeal gill	[+] 1 stage UBERON:0000066fully formed stage	5.85e3 5.85e3	80.41 80.41	AEIR AEIR
UBERON:0007132	head kidney	[+] 1 stage UBERON:0000066fully formed stage	6.30e3 6.30e3	78.91 78.91	AEIR AEIR
UBERON:0000160	intestine	[+] 1 stage UBERON:0000066fully formed stage	6.45e3 6.45e3	78.41 78.41	AEIR AEIR
UBERON:0002415	tail	[+] 1 stage UBERON:0000066fully formed stage	6.58e3 6.58e3	77.98 77.98	AEIR AEIR
UBERON:0000014	zone of skin	[+] 1 stage UBERON:0000066fully formed stage	7.07e3 7.07e3	76.34 76.34	AEIR AEIR
UBERON:0000948	heart	[+] 2 stages UBERON:0000066fully formed stage ZFS:0000036Larval:Day 4	7.30e3 7.30e3 8.82e3	75.56 75.56 70.47	AEIR AEIR AEIR
UBERON:0002107	liver	[+] 1 stage UBERON:0000066fully formed stage	7.72e3 7.72e3	74.15 74.15	AEIR AEIR
UBERON:0000922	embryo	[+] 5 stages ZFS:0000029Pharyngula:Prim-5 UBERON:0004707pharyngula stage UBERON:0000068embryo stage ZFS:0000033Hatching:Long-pec ZFS:0000037Larval:Day 5	7.75e3 7.75e3 8.74e3 9.58e3 1.06e4 1.42e4	74.05 74.05 70.73 67.93 64.45 52.54	AEIR AEIR AEIR AEIR AEIR AEIR
UBERON:0000970	eye	[+] 1 stage ZFS:0000031Pharyngula:Prim-25	7.93e3 7.93e3	73.44 73.44	AEIR AEIR
UBERON:0004734	gastrula	[+] 2 stages ZFS:0000022Gastrula:Bud ZFS:0000019Gastrula:Shield	7.98e3 7.98e3 8.64e3	73.29 73.29 71.08	AEIR AEIR AEIR
UBERON:0002548	larva	[+] 2 stages UBERON:0000069larval stage ZFS:0000037Larval:Day 5	8.65e3 8.65e3 1.15e4	71.02 71.02 61.45	AEIR AEIR AEIR
UBERON:0002385	muscle tissue	[+] 1 stage UBERON:0000066fully formed stage	9.08e3 9.08e3	69.60 69.60	AEIR AEIR
UBERON:0002481	bone tissue	[+] 1 stage UBERON:0000066fully formed stage	9.23e3 9.23e3	69.10 69.10	AEIR AEIR
UBERON:0002106	spleen	[+] 1 stage UBERON:0000066fully formed stage	9.46e3 9.46e3	68.34 68.34	AEIR AEIR
CL:0000094	granulocyte	[+] 1 stage UBERON:0000066fully formed stage	9.49e3 9.49e3	68.22 68.22	AEIR AEIR
UBERON:0000033	head	[+] 2 stages UBERON:0000066fully formed stage ZFS:0000037Larval:Day 5	9.64e3 9.64e3 1.37e4	67.72 67.72 54.05	AEIR AEIR AEIR
UBERON:0000307	blastula	[+] 2 stages ZFS:0000015Blastula:Dome ZFS:0000011Blastula:1k-cell	1.00e4 1.00e4 1.12e4	66.36 66.36 62.37	AEIR AEIR AEIR
UBERON:0001630	muscle organ	[+] 1 stage UBERON:0000066fully formed stage	1.11e4 1.11e4	62.98 62.98	AEIR AEIR
UBERON:0019248	early embryo	[+] 1 stage UBERON:0000107cleavage stage	1.18e4 1.18e4	60.41 60.41	AEIR AEIR
UBERON:0000955	brain	[+] 1 stage UBERON:0000066fully formed stage	1.23e4 1.23e4	58.78 58.78	AEIR AEIR
UBERON:0003982	mature ovarian follicle	[+] 1 stage UBERON:0000066fully formed stage	1.24e4 1.24e4	58.35 58.35	AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

EST data: Bgee
RNA-Seq data: Bgee

Sources of raw data:

EST data: UniGene
RNA-Seq data: GEO

Orthologs

Taxon name	Species with orthologs	Gene(s)	Expression comparison	See details
Euteleostomi	17 species Homo sapiens (human) Mus musculus (mouse) Pan troglodytes (chimpanzee) Gorilla gorilla (gorilla) Macaca mulatta (macaque) Rattus norvegicus (rat) Bos taurus (cattle) Sus scrofa (pig) Equus caballus (horse) Canis lupus familiaris (dog) Felis catus (cat) Cavia porcellus (guinea pig) Erinaceus europaeus (hedgehog) Monodelphis domestica (opossum) Gallus gallus (chicken) Anolis carolinensis (green anole) Xenopus tropicalis (western clawed frog)	18 genes ENSG00000150977 RILPL2 ENSMUSG00000029401 Rilpl2 ENSPTRG00000005599 RILPL2 ENSGGOG00000010811 RILPL2 ENSMMUG00000031493 RILPL2 ENSRNOG00000001061 Rilpl2 ENSBTAG00000007804 RILPL2 ENSSSCG00000009778 RILPL2 ENSECAG00000006019 RILPL2 ENSCAFG00000007489 RILPL2 ENSFCAG00000001158 RILPL2 ENSCPOG00000026321 RILPL2 ENSEEUG00000000388 RILPL2 ENSMODG00000012479 ENSMODG00000020225 ENSGALG00000003321 RILPL2 ENSACAG00000015423 RILPL2 ENSXETG00000005821 rilpl2	Compare expression	[+]

Orthology information comes from OMA : ENSDARG00000024818.

Cross-references

Ensembl	ENSDARG00000024818 (rilpl2)
ZFIN	ZDB-GENE-030131-6682 (rilpl2)
EMBL	BC135027, CR847941
Uniprot/SWISSPROT	A4IGC3, RIPL2_DANRE