D. rerio Gene: dscama - ENSDARG00000024865 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000024865
Namedscama
DescriptionDown syndrome cell adhesion molecule a [Source:ZFIN;Acc:ZDB-GENE-050310-7]
OrganismDanio rerio (zebrafish)
Synonym(s)dscam, zdscam

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000019camera-type eye
  • ZFS:0000035Larval:Protruding-mouth
1.36e3
  • 1.36e3
95.39687
  • 95.39687
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
5.50e3
  • 5.50e3
81.41932
  • 81.41932
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
5.79e3
  • 5.79e3
  • 1.18e4
80.44241
  • 80.44241
  • 59.98986
AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • ZFS:0000012Blastula:High
  • ZFS:0000024Segmentation:5-9 somites
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
6.73e3
  • 6.73e3
  • 6.73e3
  • 6.97e3
  • 1.42e4
  • 1.47e4
77.26767
  • 77.26767
  • 77.26767
  • 76.46045
  • 51.88136
  • 50.19874
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
7.41e3
  • 7.41e3
  • 1.63e4
74.95738
  • 74.95738
  • 44.83971
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
7.62e3
  • 7.62e3
  • 8.75e3
  • 1.34e4
  • 1.61e4
  • 1.66e4
74.23332
  • 74.23332
  • 70.43821
  • 54.69217
  • 45.61371
  • 43.86761
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000532CAP motoneuron
  • ZFS:0000029Pharyngula:Prim-5
1.11e4
  • 1.11e4
62.49830
  • 62.49830
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.21e4
  • 1.21e4
59.00370
  • 59.00370
AEIR
  • AEIR
UBERON:0001017central nervous system
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
1.27e4
  • 1.27e4
  • 1.32e4
57.12595
  • 57.12595
  • 55.23779
AEIR
  • AEIR
  • AEIR
UBERON:0001891midbrain
  • ZFS:0000028Segmentation:26+ somites
1.30e4
  • 1.30e4
56.22973
  • 56.22973
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.31e4
  • 1.31e4
55.72643
  • 55.72643
AEIR
  • AEIR
UBERON:0001893telencephalon
  • ZFS:0000028Segmentation:26+ somites
1.40e4
  • 1.40e4
52.75244
  • 52.75244
AEIR
  • AEIR
UBERON:0001894diencephalon
  • ZFS:0000028Segmentation:26+ somites
1.40e4
  • 1.40e4
52.60453
  • 52.60453
AEIR
  • AEIR
ZFA:0005181VaP motor neuron (Danio)
  • ZFS:0000029Pharyngula:Prim-5
1.48e4
  • 1.48e4
49.99831
  • 49.99831
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.58e4
  • 1.58e4
46.59727
  • 46.59727
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.80e4
  • 1.80e4
39.19524
  • 39.19524
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.80e4
  • 1.80e4
39.03300
  • 39.03300
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.03e4
  • 2.03e4
31.39101
  • 31.39101
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.08e4
  • 2.08e4
29.68415
  • 29.68415
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
2.09e4
  • 2.09e4
29.38885
  • 29.38885
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • EST data: UniGene
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Cross-references

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