D. rerio Gene: stil - ENSDARG00000024904 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000024904
Namestil
Descriptionscl/tal1 interrupting locus [Source:ZFIN;Acc:ZDB-GENE-020419-39]
OrganismDanio rerio (zebrafish)
Synonym(s)cassiopeia, chunp6907, csp, nbb, q1lv59, q58eb7, sill, tal1 (scl) interrupting locus like, zgc:110502

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
625
  • 625
97.91
  • 97.91
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
823
  • 823
97.25
  • 97.25
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
  • UBERON:0000068embryo stage
  • ZFS:0000036Larval:Day 4
  • ZFS:0000037Larval:Day 5
1.27e3
  • 1.27e3
  • 6.84e3
  • 7.36e3
  • 7.54e3
  • 7.70e3
  • 9.37e3
  • 9.91e3
  • 1.14e4
  • 1.14e4
  • 1.29e4
  • 1.49e4
  • 1.50e4
  • 1.54e4
  • 1.59e4
95.76
  • 95.76
  • 77.10
  • 75.36
  • 74.76
  • 74.23
  • 68.64
  • 66.83
  • 61.90
  • 61.74
  • 56.79
  • 50.25
  • 49.80
  • 48.30
  • 46.76
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
1.60e3
  • 1.60e3
94.64
  • 94.64
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
1.79e3
  • 1.79e3
  • 5.26e3
  • 6.10e3
  • 8.80e3
  • 1.06e4
94.02
  • 94.02
  • 82.40
  • 79.59
  • 70.54
  • 64.37
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
4.06e3
  • 4.06e3
86.42
  • 86.42
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
5.72e3
  • 5.72e3
  • 9.64e3
  • 1.50e4
80.84
  • 80.84
  • 67.72
  • 49.87
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
5.85e3
  • 5.85e3
80.43
  • 80.43
AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
6.37e3
  • 6.37e3
78.66
  • 78.66
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000109gastrula stage
6.53e3
  • 6.53e3
  • 6.65e3
  • 6.88e3
  • 7.32e3
  • 7.38e3
  • 1.07e4
78.15
  • 78.15
  • 77.74
  • 76.95
  • 75.50
  • 75.30
  • 64.23
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
6.97e3
  • 6.97e3
76.66
  • 76.66
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
7.18e3
  • 7.18e3
75.98
  • 75.98
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
7.64e3
  • 7.64e3
74.43
  • 74.43
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
9.24e3
  • 9.24e3
  • 9.86e3
  • 1.04e4
  • 1.08e4
  • 1.08e4
  • 1.10e4
  • 1.15e4
  • 1.33e4
  • 1.62e4
  • 1.94e4
69.05
  • 69.05
  • 66.98
  • 65.30
  • 63.98
  • 63.70
  • 63.27
  • 61.48
  • 55.42
  • 45.69
  • 35.04
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
9.68e3
  • 9.68e3
67.59
  • 67.59
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
9.89e3
  • 9.89e3
66.89
  • 66.89
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.05e4
  • 1.05e4
64.93
  • 64.93
AEIR
  • AEIR
UBERON:0003065ciliary marginal zone
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000033Hatching:Long-pec
1.07e4
  • 1.07e4
  • 1.19e4
64.28
  • 64.28
  • 60.00
AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.07e4
  • 1.07e4
64.11
  • 64.11
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.13e4
  • 1.13e4
62.09
  • 62.09
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.17e4
  • 1.17e4
60.95
  • 60.95
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.17e4
  • 1.17e4
60.84
  • 60.84
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000035Larval:Protruding-mouth
1.25e4
  • 1.25e4
  • 1.34e4
  • 1.36e4
58.27
  • 58.27
  • 54.99
  • 54.53
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
1.27e4
  • 1.27e4
57.34
  • 57.34
AEIR
  • AEIR
UBERON:0002240spinal cord
  • ZFS:0000029Pharyngula:Prim-5
1.28e4
  • 1.28e4
57.11
  • 57.11
AEIR
  • AEIR
UBERON:0002120pronephros
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000031Pharyngula:Prim-25
1.34e4
  • 1.34e4
  • 1.38e4
54.99
  • 54.99
  • 53.83
AEIR
  • AEIR
  • AEIR
UBERON:0003072optic cup
  • ZFS:0000029Pharyngula:Prim-5
1.34e4
  • 1.34e4
54.99
  • 54.99
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
1.37e4
  • 1.37e4
54.11
  • 54.11
AEIR
  • AEIR
UBERON:0003053ventricular zone
  • ZFS:0000035Larval:Protruding-mouth
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000037Larval:Day 5
1.58e4
  • 1.58e4
  • 1.72e4
  • 1.96e4
46.95
  • 46.95
  • 42.30
  • 34.53
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.69e4
  • 1.69e4
43.47
  • 43.47
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.75e4
  • 1.75e4
41.39
  • 41.39
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.81e4
  • 1.81e4
39.52
  • 39.52
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.84e4
  • 1.84e4
38.44
  • 38.44
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.94e4
  • 1.94e4
35.17
  • 35.17
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EMBLAY099525, BC091991, BX908392
EnsemblENSDARG00000024904 (stil)
Uniprot/SWISSPROTQ8JGS1, STIL_DANRE
ZFINZDB-GENE-020419-39 (stil)

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