D. rerio Gene: tmem136a - ENSDARG00000024920 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000024920
Nametmem136a
Descriptiontransmembrane protein 136a [Source:ZFIN;Acc:ZDB-GENE-000607-58]
OrganismDanio rerio (zebrafish)
Synonym(s)fj54b05, id:ibd5089, wu:fj54b05

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • UBERON:0000109gastrula stage
2.65e3
  • 2.65e3
  • 3.09e3
  • 4.18e3
  • 4.18e3
  • 4.41e3
  • 5.71e3
91.12
  • 91.12
  • 89.65
  • 86.01
  • 86.00
  • 85.23
  • 80.87
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
4.32e3
  • 4.32e3
85.53
  • 85.53
AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
4.50e3
  • 4.50e3
84.93
  • 84.93
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000016Blastula:30%-epiboly
4.80e3
  • 4.80e3
  • 8.70e3
  • 9.39e3
83.94
  • 83.94
  • 70.87
  • 68.57
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000036Larval:Day 4
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000042Juvenile:Days 30-44
4.82e3
  • 4.82e3
  • 5.16e3
  • 5.71e3
  • 6.23e3
  • 7.10e3
  • 8.30e3
  • 1.04e4
  • 1.06e4
  • 1.12e4
  • 1.12e4
  • 1.17e4
  • 1.18e4
  • 1.20e4
83.86
  • 83.86
  • 82.71
  • 80.87
  • 79.15
  • 76.23
  • 72.22
  • 65.23
  • 64.42
  • 62.48
  • 62.44
  • 60.89
  • 60.56
  • 59.73
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000027Segmentation:20-25 somites
4.96e3
  • 4.96e3
  • 1.34e4
83.40
  • 83.40
  • 54.97
AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
5.62e3
  • 5.62e3
81.19
  • 81.19
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
6.05e3
  • 6.05e3
  • 1.21e4
79.75
  • 79.75
  • 59.33
AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
6.62e3
  • 6.62e3
77.83
  • 77.83
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
6.88e3
  • 6.88e3
76.98
  • 76.98
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
7.26e3
  • 7.26e3
75.70
  • 75.70
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
7.64e3
  • 7.64e3
  • 1.35e4
74.41
  • 74.41
  • 54.80
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000024Segmentation:5-9 somites
  • UBERON:0004707pharyngula stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000030Pharyngula:Prim-15
8.10e3
  • 8.10e3
  • 8.56e3
  • 8.57e3
  • 8.58e3
  • 9.56e3
  • 9.77e3
  • 1.05e4
  • 1.06e4
  • 1.11e4
  • 1.27e4
72.89
  • 72.89
  • 71.35
  • 71.31
  • 71.26
  • 68.00
  • 67.29
  • 64.85
  • 64.39
  • 63.00
  • 57.42
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
8.99e3
  • 8.99e3
  • 9.40e3
  • 9.47e3
  • 1.08e4
69.89
  • 69.89
  • 68.53
  • 68.28
  • 63.79
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
9.64e3
  • 9.64e3
67.72
  • 67.72
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.13e4
  • 1.13e4
62.24
  • 62.24
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.14e4
  • 1.14e4
61.66
  • 61.66
AEIR
  • AEIR
UBERON:0000926mesoderm
  • ZFS:0000024Segmentation:5-9 somites
1.20e4
  • 1.20e4
59.98
  • 59.98
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
1.22e4
  • 1.22e4
  • 1.25e4
  • 1.43e4
59.25
  • 59.25
  • 58.03
  • 52.25
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.27e4
  • 1.27e4
57.59
  • 57.59
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
1.28e4
  • 1.28e4
  • 1.29e4
57.15
  • 57.15
  • 56.97
AEIR
  • AEIR
  • AEIR
UBERON:0002533post-anal tail bud
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000029Pharyngula:Prim-5
1.36e4
  • 1.36e4
  • 1.38e4
54.53
  • 54.53
  • 53.83
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
1.46e4
  • 1.46e4
  • 1.53e4
50.99
  • 50.99
  • 48.76
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.49e4
  • 1.49e4
50.08
  • 50.08
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.51e4
  • 1.51e4
49.58
  • 49.58
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.54e4
  • 1.54e4
48.58
  • 48.58
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.63e4
  • 1.63e4
45.50
  • 45.50
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.67e4
  • 1.67e4
44.18
  • 44.18
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.85e4
  • 1.85e4
38.19
  • 38.19
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EMBLCR457443
EnsemblENSDARG00000024920 (tmem136a)
Uniprot/SPTREMBLE7F142, E7F142_DANRE
ZFINZDB-GENE-000607-58 (tmem136a)

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