D. rerio Gene: rnf144b - ENSDARG00000024940 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000024940
Namernf144b
Descriptionring finger protein 144B [Source:ZFIN;Acc:ZDB-GENE-040426-1292]
OrganismDanio rerio (zebrafish)
Synonym(s)ibrdc2, zgc:63907

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.79e3
  • 1.79e3
94.01
  • 94.01
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
2.35e3
  • 2.35e3
92.12
  • 92.12
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • UBERON:0000109gastrula stage
2.47e3
  • 2.47e3
  • 5.73e3
  • 6.31e3
  • 8.57e3
  • 8.76e3
  • 1.03e4
91.72
  • 91.72
  • 80.82
  • 78.88
  • 71.30
  • 70.65
  • 65.61
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
3.98e3
  • 3.98e3
86.67
  • 86.67
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
4.06e3
  • 4.06e3
86.40
  • 86.40
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
4.14e3
  • 4.14e3
86.14
  • 86.14
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
4.47e3
  • 4.47e3
85.02
  • 85.02
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
4.49e3
  • 4.49e3
84.97
  • 84.97
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
5.34e3
  • 5.34e3
82.14
  • 82.14
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
5.99e3
  • 5.99e3
79.94
  • 79.94
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • UBERON:0000106zygote stage
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • UBERON:0000066fully formed stage
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000036Larval:Day 4
  • UBERON:0000104life cycle
  • ZFS:0000037Larval:Day 5
6.14e3
  • 6.14e3
  • 7.29e3
  • 8.07e3
  • 8.81e3
  • 1.14e4
  • 1.18e4
  • 1.35e4
  • 1.40e4
  • 1.40e4
  • 1.42e4
  • 1.44e4
  • 1.47e4
  • 1.48e4
  • 1.49e4
  • 1.50e4
  • 1.50e4
79.43
  • 79.43
  • 75.58
  • 72.98
  • 70.50
  • 61.75
  • 60.58
  • 54.77
  • 53.25
  • 53.00
  • 52.38
  • 51.90
  • 50.68
  • 50.59
  • 50.21
  • 49.92
  • 49.73
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
6.46e3
  • 6.46e3
  • 1.10e4
78.36
  • 78.36
  • 63.32
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
6.96e3
  • 6.96e3
  • 9.69e3
76.70
  • 76.70
  • 67.55
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
7.16e3
  • 7.16e3
76.03
  • 76.03
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
7.71e3
  • 7.71e3
  • 8.61e3
  • 1.58e4
74.18
  • 74.18
  • 71.19
  • 47.11
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
8.21e3
  • 8.21e3
  • 1.44e4
72.52
  • 72.52
  • 51.89
AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000016Blastula:30%-epiboly
8.21e3
  • 8.21e3
  • 8.94e3
  • 9.76e3
  • 1.03e4
  • 1.21e4
72.52
  • 72.52
  • 70.06
  • 67.31
  • 65.37
  • 59.61
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
8.58e3
  • 8.58e3
  • 8.72e3
  • 9.69e3
  • 1.03e4
  • 1.26e4
  • 1.28e4
  • 1.29e4
  • 1.29e4
  • 1.48e4
  • 1.50e4
71.27
  • 71.27
  • 70.79
  • 67.54
  • 65.67
  • 57.71
  • 57.31
  • 56.92
  • 56.87
  • 50.31
  • 49.83
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
8.73e3
  • 8.73e3
  • 9.30e3
70.77
  • 70.77
  • 68.85
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
9.09e3
  • 9.09e3
69.56
  • 69.56
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
9.16e3
  • 9.16e3
69.33
  • 69.33
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
9.42e3
  • 9.42e3
  • 1.12e4
  • 1.45e4
68.45
  • 68.45
  • 62.58
  • 51.37
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.03e4
  • 1.03e4
65.52
  • 65.52
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
1.05e4
  • 1.05e4
64.91
  • 64.91
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.15e4
  • 1.15e4
61.65
  • 61.65
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.29e4
  • 1.29e4
56.78
  • 56.78
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.32e4
  • 1.32e4
55.68
  • 55.68
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.37e4
  • 1.37e4
54.09
  • 54.09
AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.65e4
  • 1.65e4
44.73
  • 44.73
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.65e4
  • 1.65e4
44.68
  • 44.68
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Cross-references

EnsemblENSDARG00000024940 (rnf144b)
Uniprot/SPTREMBLF1R2U0, F1R2U0_DANRE
ZFINZDB-GENE-040426-1292 (rnf144b)

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