D. rerio Gene: grnb - ENSDARG00000025081 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000025081
Namegrnb
Descriptiongranulin b [Source:ZFIN;Acc:ZDB-GENE-030131-7393]
OrganismDanio rerio (zebrafish)
Synonym(s)fj14b08, wu:fj14b08, zfpgrn-b, zgc:111858

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
  • ZFS:0000035Larval:Protruding-mouth
2.95e3
  • 2.95e3
  • 1.24e4
90.13
  • 90.13
  • 58.33
AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000016Blastula:30%-epiboly
3.32e3
  • 3.32e3
  • 3.53e3
  • 9.02e3
  • 9.23e3
  • 1.10e4
88.90
  • 88.90
  • 88.19
  • 69.82
  • 69.08
  • 63.13
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
3.35e3
  • 3.35e3
88.78
  • 88.78
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • UBERON:0000109gastrula stage
  • ZFS:0000020Gastrula:75%-epiboly
3.47e3
  • 3.47e3
  • 5.17e3
  • 6.15e3
  • 7.29e3
  • 1.12e4
  • 1.15e4
88.40
  • 88.40
  • 82.68
  • 79.41
  • 75.59
  • 62.42
  • 61.36
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
3.70e3
  • 3.70e3
87.63
  • 87.63
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
3.71e3
  • 3.71e3
87.60
  • 87.60
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
3.81e3
  • 3.81e3
87.24
  • 87.24
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
3.82e3
  • 3.82e3
  • 1.47e4
87.23
  • 87.23
  • 50.63
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
4.35e3
  • 4.35e3
85.43
  • 85.43
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
4.83e3
  • 4.83e3
83.83
  • 83.83
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000026Segmentation:14-19 somites
5.21e3
  • 5.21e3
  • 7.22e3
  • 7.65e3
  • 7.84e3
  • 9.33e3
  • 1.32e4
  • 1.39e4
  • 1.40e4
  • 1.40e4
  • 1.41e4
82.57
  • 82.57
  • 75.84
  • 74.38
  • 73.75
  • 68.76
  • 55.70
  • 53.29
  • 53.26
  • 53.09
  • 52.73
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
5.26e3
  • 5.26e3
82.39
  • 82.39
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
5.35e3
  • 5.35e3
82.10
  • 82.10
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:00072334 cell stage
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000027Segmentation:20-25 somites
  • UBERON:0004707pharyngula stage
  • UBERON:00072322 cell stage
  • UBERON:00072368 cell stage
  • ZFS:0000006Cleavage:32-cell
  • ZFS:0000007Cleavage:64-cell
  • ZFS:0000008Blastula:128-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000010Blastula:512-cell
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000012Blastula:High
  • ZFS:0000013Blastula:Oblong
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000005Cleavage:16-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000016Blastula:30%-epiboly
  • UBERON:0000106zygote stage
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000036Larval:Day 4
  • ZFS:0000037Larval:Day 5
5.43e3
  • 5.43e3
  • 5.69e3
  • 7.03e3
  • 7.47e3
  • 7.47e3
  • 7.91e3
  • 7.97e3
  • 8.15e3
  • 8.15e3
  • 8.15e3
  • 8.15e3
  • 8.15e3
  • 8.15e3
  • 8.15e3
  • 8.15e3
  • 8.15e3
  • 8.15e3
  • 8.15e3
  • 8.15e3
  • 8.71e3
  • 8.71e3
  • 9.96e3
  • 9.96e3
  • 1.20e4
  • 1.34e4
  • 1.35e4
  • 1.37e4
  • 1.39e4
  • 1.41e4
  • 1.43e4
  • 1.46e4
  • 1.48e4
  • 1.50e4
  • 1.50e4
  • 1.51e4
  • 1.55e4
  • 1.57e4
81.81
  • 81.81
  • 80.95
  • 76.46
  • 74.99
  • 74.99
  • 73.52
  • 73.32
  • 72.72
  • 72.72
  • 72.72
  • 72.72
  • 72.72
  • 72.72
  • 72.72
  • 72.72
  • 72.72
  • 72.72
  • 72.72
  • 72.72
  • 70.82
  • 70.82
  • 66.65
  • 66.65
  • 59.71
  • 54.97
  • 54.89
  • 54.00
  • 53.39
  • 52.67
  • 51.96
  • 51.05
  • 50.53
  • 49.92
  • 49.80
  • 49.38
  • 48.11
  • 47.53
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
5.66e3
  • 5.66e3
81.05
  • 81.05
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
5.90e3
  • 5.90e3
  • 6.73e3
80.25
  • 80.25
  • 77.47
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
6.03e3
  • 6.03e3
79.80
  • 79.80
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
6.50e3
  • 6.50e3
78.22
  • 78.22
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
6.52e3
  • 6.52e3
78.16
  • 78.16
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
6.59e3
  • 6.59e3
77.93
  • 77.93
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
6.62e3
  • 6.62e3
77.84
  • 77.84
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
6.67e3
  • 6.67e3
77.66
  • 77.66
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
7.38e3
  • 7.38e3
75.31
  • 75.31
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
7.59e3
  • 7.59e3
74.58
  • 74.58
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
8.16e3
  • 8.16e3
  • 1.17e4
  • 1.20e4
  • 1.30e4
72.68
  • 72.68
  • 60.96
  • 59.91
  • 56.63
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
8.81e3
  • 8.81e3
  • 1.07e4
70.49
  • 70.49
  • 64.34
AEIR
  • AEIR
  • AEIR
UBERON:0001017central nervous system
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000027Segmentation:20-25 somites
9.96e3
  • 9.96e3
  • 1.28e4
  • 1.41e4
66.67
  • 66.67
  • 57.13
  • 52.92
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
1.05e4
  • 1.05e4
  • 1.18e4
  • 1.50e4
64.93
  • 64.93
  • 60.49
  • 49.93
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
1.05e4
  • 1.05e4
  • 1.33e4
64.75
  • 64.75
  • 55.34
AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.12e4
  • 1.12e4
62.56
  • 62.56
AEIR
  • AEIR
UBERON:0001264pancreas
  • ZFS:0000037Larval:Day 5
1.16e4
  • 1.16e4
61.10
  • 61.10
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.17e4
  • 1.17e4
60.86
  • 60.86
AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
1.18e4
  • 1.18e4
  • 1.34e4
60.38
  • 60.38
  • 54.99
AEIR
  • AEIR
  • AEIR
UBERON:0000162cloaca
  • ZFS:0000037Larval:Day 5
1.19e4
  • 1.19e4
60.00
  • 60.00
AEIR
  • AEIR
ZFA:0000003adaxial cell (Danio)
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000026Segmentation:14-19 somites
1.19e4
  • 1.19e4
  • 1.31e4
60.00
  • 60.00
  • 56.23
AEIR
  • AEIR
  • AEIR
UBERON:2000088YSL
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
1.20e4
  • 1.20e4
  • 1.31e4
  • 1.32e4
59.98
  • 59.98
  • 56.23
  • 55.86
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003068axial mesoderm
  • ZFS:0000024Segmentation:5-9 somites
1.24e4
  • 1.24e4
58.33
  • 58.33
AEIR
  • AEIR
UBERON:0003081lateral plate mesoderm
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
1.28e4
  • 1.28e4
  • 1.31e4
  • 1.49e4
57.14
  • 57.14
  • 56.24
  • 49.99
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004128optic vesicle
  • ZFS:0000024Segmentation:5-9 somites
1.28e4
  • 1.28e4
57.13
  • 57.13
AEIR
  • AEIR
UBERON:0002028hindbrain
  • ZFS:0000029Pharyngula:Prim-5
1.28e4
  • 1.28e4
57.11
  • 57.11
AEIR
  • AEIR
UBERON:0000178blood
  • ZFS:0000033Hatching:Long-pec
1.31e4
  • 1.31e4
56.24
  • 56.24
AEIR
  • AEIR
UBERON:0010312immature eye
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000029Pharyngula:Prim-5
1.33e4
  • 1.33e4
  • 1.34e4
  • 1.35e4
55.53
  • 55.53
  • 55.24
  • 54.73
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002533post-anal tail bud
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000027Segmentation:20-25 somites
1.34e4
  • 1.34e4
  • 1.36e4
55.24
  • 55.24
  • 54.53
AEIR
  • AEIR
  • AEIR
UBERON:0001891midbrain
  • ZFS:0000029Pharyngula:Prim-5
1.34e4
  • 1.34e4
54.97
  • 54.97
AEIR
  • AEIR
UBERON:2005316fin fold pectoral fin bud
  • ZFS:0000033Hatching:Long-pec
1.37e4
  • 1.37e4
54.15
  • 54.15
AEIR
  • AEIR
UBERON:0000925endoderm
  • ZFS:0000029Pharyngula:Prim-5
1.39e4
  • 1.39e4
53.55
  • 53.55
AEIR
  • AEIR
UBERON:0001890forebrain
  • ZFS:0000029Pharyngula:Prim-5
1.49e4
  • 1.49e4
49.97
  • 49.97
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

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