D. rerio Gene: cd63 - ENSDARG00000025147 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000025147
Namecd63
DescriptionCD63 molecule [Source:ZFIN;Acc:ZDB-GENE-030131-180]
OrganismDanio rerio (zebrafish)
Synonym(s)cd163, wu:fb16b08, zgc:65825, zgc:77709
Orthologs(s)17 orthologs
Paralog(s)12 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
152
  • 152
99.49
  • 99.49
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
178
  • 178
99.41
  • 99.41
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
186
  • 186
99.38
  • 99.38
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
191
  • 191
99.36
  • 99.36
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
252
  • 252
99.16
  • 99.16
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
333
  • 333
98.89
  • 98.89
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
408
  • 408
98.64
  • 98.64
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
430
  • 430
  • 489
98.56
  • 98.56
  • 98.37
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
449
  • 449
  • 481
98.50
  • 98.50
  • 98.39
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
531
  • 531
  • 1.02e3
98.23
  • 98.23
  • 96.60
AEIR
  • AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
538
  • 538
98.20
  • 98.20
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000036Larval:Day 4
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000037Larval:Day 5
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000066fully formed stage
  • UBERON:0000068embryo stage
  • ZFS:0000016Blastula:30%-epiboly
  • UBERON:0000104life cycle
  • UBERON:0000106zygote stage
  • ZFS:0000049segmentation
559
  • 559
  • 604
  • 687
  • 893
  • 959
  • 990
  • 1.11e3
  • 1.15e3
  • 1.62e3
  • 4.07e3
  • 4.19e3
  • 4.80e3
  • 7.43e3
  • 1.17e4
  • 1.26e4
  • 1.29e4
  • 1.38e4
  • 1.41e4
  • 1.45e4
98.13
  • 98.13
  • 97.98
  • 97.70
  • 97.01
  • 96.79
  • 96.69
  • 96.28
  • 96.16
  • 94.59
  • 86.37
  • 85.97
  • 83.92
  • 75.13
  • 60.72
  • 57.89
  • 56.65
  • 53.85
  • 52.64
  • 51.51
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000104life cycle
561
  • 561
  • 733
  • 1.45e4
98.12
  • 98.12
  • 97.55
  • 51.33
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
601
  • 601
  • 670
  • 806
97.99
  • 97.99
  • 97.76
  • 97.30
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
607
  • 607
97.97
  • 97.97
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
743
  • 743
  • 746
  • 768
  • 819
  • 956
  • 1.07e3
  • 1.11e3
  • 1.21e3
  • 1.24e3
  • 1.85e3
97.52
  • 97.52
  • 97.51
  • 97.43
  • 97.26
  • 96.80
  • 96.41
  • 96.30
  • 95.96
  • 95.84
  • 93.81
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
813
  • 813
97.28
  • 97.28
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.00e3
  • 1.00e3
96.64
  • 96.64
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.12e3
  • 1.12e3
96.24
  • 96.24
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.15e3
  • 1.15e3
96.16
  • 96.16
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.26e3
  • 1.26e3
95.77
  • 95.77
AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.37e3
  • 1.37e3
95.41
  • 95.41
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
2.11e3
  • 2.11e3
92.93
  • 92.93
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000109gastrula stage
2.16e3
  • 2.16e3
  • 4.03e3
  • 4.45e3
  • 4.69e3
  • 6.57e3
  • 9.62e3
92.76
  • 92.76
  • 86.51
  • 85.09
  • 84.28
  • 78.01
  • 67.79
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
2.78e3
  • 2.78e3
90.71
  • 90.71
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
2.94e3
  • 2.94e3
90.15
  • 90.15
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
3.26e3
  • 3.26e3
  • 3.38e3
  • 6.50e3
  • 1.30e4
89.10
  • 89.10
  • 88.70
  • 78.22
  • 56.57
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002538hatching gland
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000032Pharyngula:High-pec
4.98e3
  • 4.98e3
  • 4.98e3
  • 6.22e3
  • 6.40e3
  • 8.04e3
  • 1.09e4
  • 1.20e4
  • 1.49e4
83.33
  • 83.33
  • 83.33
  • 79.16
  • 78.57
  • 73.07
  • 63.63
  • 59.98
  • 49.99
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:2000058polster
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
5.98e3
  • 5.98e3
  • 7.47e3
  • 9.96e3
  • 1.16e4
  • 1.49e4
  • 1.49e4
79.99
  • 79.99
  • 75.00
  • 66.65
  • 61.09
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:2000090apical ectodermal ridge dorsal fin
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000033Hatching:Long-pec
7.47e3
  • 7.47e3
  • 1.12e4
75.00
  • 75.00
  • 62.50
AEIR
  • AEIR
  • AEIR
UBERON:0003060pronephric duct
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000028Segmentation:26+ somites
7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 1.12e4
  • 1.26e4
74.99
  • 74.99
  • 74.99
  • 74.99
  • 62.48
  • 57.87
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001997olfactory epithelium
  • UBERON:0000104life cycle
8.65e3
  • 8.65e3
71.04
  • 71.04
AEIR
  • AEIR
UBERON:2001055pronephric duct opening
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
8.96e3
  • 8.96e3
  • 9.96e3
70.00
  • 70.00
  • 66.67
AEIR
  • AEIR
  • AEIR
UBERON:0002328notochord
  • ZFS:0000033Hatching:Long-pec
8.96e3
  • 8.96e3
69.99
  • 69.99
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
9.05e3
  • 9.05e3
69.72
  • 69.72
AEIR
  • AEIR
UBERON:0003097dorsal fin
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
9.96e3
  • 9.96e3
  • 9.96e3
  • 1.49e4
66.67
  • 66.67
  • 66.67
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
1.03e4
  • 1.03e4
  • 1.11e4
  • 1.51e4
65.54
  • 65.54
  • 62.74
  • 49.38
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:2000004anterior axial hypoblast
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000021Gastrula:90%-epiboly
1.17e4
  • 1.17e4
  • 1.20e4
  • 1.39e4
  • 1.39e4
  • 1.39e4
  • 1.39e4
60.70
  • 60.70
  • 59.98
  • 53.55
  • 53.55
  • 53.55
  • 53.55
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001042chordate pharynx
  • ZFS:0000037Larval:Day 5
1.19e4
  • 1.19e4
60.00
  • 60.00
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000066fully formed stage
1.32e4
  • 1.32e4
  • 1.46e4
55.82
  • 55.82
  • 51.26
AEIR
  • AEIR
  • AEIR
UBERON:0005494intermediate mesenchyme
  • ZFS:0000031Pharyngula:Prim-25
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.58e4
  • 1.58e4
46.93
  • 46.93
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Opisthokonta12 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000025147.

Cross-references

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