D. rerio Gene: syt2a - ENSDARG00000025206 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000025206
Namesyt2a
Descriptionsynaptotagmin IIa [Source:ZFIN;Acc:ZDB-GENE-060503-315]
OrganismDanio rerio (zebrafish)
Synonym(s)si:ch211-236j4.1

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
1.62e3
  • 1.62e3
94.59
  • 94.59
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0004707pharyngula stage
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
5.50e3
  • 5.50e3
  • 1.43e4
  • 1.61e4
  • 1.82e4
  • 1.85e4
81.60
  • 81.60
  • 52.01
  • 46.24
  • 38.90
  • 38.09
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
7.63e3
  • 7.63e3
74.46
  • 74.46
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
9.99e3
  • 9.99e3
  • 1.45e4
66.55
  • 66.55
  • 51.30
AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.44e4
  • 1.44e4
51.91
  • 51.91
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
1.49e4
  • 1.49e4
  • 1.89e4
49.96
  • 49.96
  • 36.83
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.58e4
  • 1.58e4
  • 1.65e4
47.10
  • 47.10
  • 44.70
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.06e4
  • 2.06e4
31.13
  • 31.13
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
2.18e4
  • 2.18e4
26.85
  • 26.85
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
2.27e4
  • 2.27e4
23.97
  • 23.97
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLBX248496, BX323087
EnsemblENSDARG00000025206 (syt2a)
Uniprot/SPTREMBLF1R0Q0, F1R0Q0_DANRE
ZFINZDB-GENE-060503-315 (syt2a)

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