D. rerio Gene: lipt1 - ENSDARG00000025233 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000025233
Namelipt1
Descriptionlipoyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-060929-112]
OrganismDanio rerio (zebrafish)
Synonym(s)fi89f05, wu:fi89f05, zgc:152851
Orthologs(s)22 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
5.26e3
  • 5.26e3
  • 1.50e4
82.39
  • 82.39
  • 49.89
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
6.64e3
  • 6.64e3
77.78
  • 77.78
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
7.12e3
  • 7.12e3
  • 1.44e4
76.15
  • 76.15
  • 51.84
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
7.70e3
  • 7.70e3
74.24
  • 74.24
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
8.11e3
  • 8.11e3
72.85
  • 72.85
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
8.71e3
  • 8.71e3
70.84
  • 70.84
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
9.02e3
  • 9.02e3
69.80
  • 69.80
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
9.61e3
  • 9.61e3
  • 1.07e4
  • 1.11e4
  • 1.13e4
  • 1.16e4
  • 1.16e4
  • 1.24e4
  • 1.28e4
  • 1.29e4
  • 1.64e4
67.83
  • 67.83
  • 64.32
  • 62.82
  • 62.03
  • 61.30
  • 61.17
  • 58.39
  • 57.09
  • 56.66
  • 45.07
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
9.69e3
  • 9.69e3
67.55
  • 67.55
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
9.86e3
  • 9.86e3
67.00
  • 67.00
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • UBERON:0000109gastrula stage
  • ZFS:0000019Gastrula:Shield
9.86e3
  • 9.86e3
  • 1.22e4
  • 1.26e4
  • 1.27e4
  • 1.28e4
  • 1.36e4
66.97
  • 66.97
  • 59.05
  • 57.72
  • 57.54
  • 57.06
  • 54.32
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
9.97e3
  • 9.97e3
  • 1.07e4
  • 1.07e4
  • 1.91e4
66.63
  • 66.63
  • 64.22
  • 64.04
  • 36.10
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000015Blastula:Dome
1.01e4
  • 1.01e4
  • 1.04e4
  • 1.04e4
  • 1.28e4
  • 1.40e4
66.22
  • 66.22
  • 65.18
  • 65.07
  • 57.12
  • 52.98
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.02e4
  • 1.02e4
65.77
  • 65.77
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.04e4
  • 1.04e4
65.06
  • 65.06
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.08e4
  • 1.08e4
63.89
  • 63.89
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.17e4
  • 1.17e4
60.67
  • 60.67
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.19e4
  • 1.19e4
60.02
  • 60.02
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.20e4
  • 1.20e4
59.79
  • 59.79
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
1.21e4
  • 1.21e4
  • 1.39e4
59.57
  • 59.57
  • 53.34
AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.23e4
  • 1.23e4
58.78
  • 58.78
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
1.24e4
  • 1.24e4
  • 1.26e4
  • 1.34e4
58.62
  • 58.62
  • 57.90
  • 55.12
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
1.24e4
  • 1.24e4
58.43
  • 58.43
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000036Larval:Day 4
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.28e4
  • 1.28e4
  • 1.29e4
  • 1.30e4
  • 1.30e4
  • 1.30e4
  • 1.31e4
  • 1.33e4
  • 1.37e4
  • 1.40e4
  • 1.43e4
  • 1.44e4
  • 1.44e4
  • 1.47e4
  • 1.47e4
57.13
  • 57.13
  • 56.84
  • 56.63
  • 56.45
  • 56.35
  • 56.26
  • 55.52
  • 54.25
  • 53.21
  • 52.15
  • 51.87
  • 51.77
  • 50.69
  • 50.68
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.31e4
  • 1.31e4
  • 1.42e4
56.00
  • 56.00
  • 52.58
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.33e4
  • 1.33e4
  • 2.08e4
55.45
  • 55.45
  • 30.31
AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.36e4
  • 1.36e4
54.52
  • 54.52
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.39e4
  • 1.39e4
53.38
  • 53.38
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.40e4
  • 1.40e4
53.02
  • 53.02
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.50e4
  • 1.50e4
49.89
  • 49.89
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.59e4
  • 1.59e4
46.89
  • 46.89
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.92e4
  • 1.92e4
35.77
  • 35.77
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi15 species15 genesCompare expression
Bilateria22 species22 genesCompare expression

Orthology information comes from OMA : ENSDARG00000025233.

Cross-references

EnsemblENSDARG00000025233 (lipt1)
ZFINZDB-GENE-060929-112 (lipt1)
EMBLBX901938
Uniprot/SPTREMBLB8A660, B8A660_DANRE

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