D. rerio Gene: prdx2 - ENSDARG00000025350 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000025350
Nameprdx2
Descriptionperoxiredoxin 2 [Source:ZFIN;Acc:ZDB-GENE-030326-2]
OrganismDanio rerio (zebrafish)
Synonym(s)cb58, prdx1, wu:fq19b09, zgc:92891

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
209
  • 209
99.30
  • 99.30
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
215
  • 215
99.28
  • 99.28
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
266
  • 266
  • 4.98e3
  • 6.54e3
  • 9.34e3
  • 1.17e4
99.11
  • 99.11
  • 83.32
  • 78.12
  • 68.74
  • 60.70
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
270
  • 270
99.10
  • 99.10
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
290
  • 290
  • 343
99.03
  • 99.03
  • 98.85
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
327
  • 327
  • 430
  • 500
  • 533
  • 550
98.91
  • 98.91
  • 98.56
  • 98.33
  • 98.22
  • 98.16
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
341
  • 341
  • 1.67e3
98.86
  • 98.86
  • 94.41
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
343
  • 343
98.85
  • 98.85
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
353
  • 353
98.82
  • 98.82
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
356
  • 356
98.81
  • 98.81
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
372
  • 372
98.76
  • 98.76
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
379
  • 379
98.73
  • 98.73
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
453
  • 453
  • 911
98.49
  • 98.49
  • 96.95
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
468
  • 468
98.44
  • 98.44
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
473
  • 473
98.42
  • 98.42
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
483
  • 483
98.39
  • 98.39
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
697
  • 697
97.67
  • 97.67
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
724
  • 724
97.58
  • 97.58
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
810
  • 810
97.29
  • 97.29
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.17e3
  • 1.17e3
96.10
  • 96.10
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
1.35e3
  • 1.35e3
  • 2.21e3
95.48
  • 95.48
  • 92.60
AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
1.44e3
  • 1.44e3
  • 1.65e3
95.18
  • 95.18
  • 94.49
AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000033Hatching:Long-pec
2.49e3
  • 2.49e3
  • 3.73e3
  • 4.27e3
  • 4.98e3
  • 5.34e3
  • 5.34e3
  • 5.60e3
91.67
  • 91.67
  • 87.50
  • 85.71
  • 83.33
  • 82.14
  • 82.14
  • 81.25
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
3.51e3
  • 3.51e3
  • 7.12e3
  • 7.47e3
  • 7.47e3
  • 7.80e3
88.25
  • 88.25
  • 76.18
  • 74.99
  • 74.98
  • 73.90
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
3.57e3
  • 3.57e3
88.05
  • 88.05
AEIR
  • AEIR
UBERON:0001555digestive tract
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000035Larval:Protruding-mouth
3.73e3
  • 3.73e3
  • 7.47e3
  • 8.53e3
  • 8.54e3
  • 9.33e3
87.50
  • 87.50
  • 74.99
  • 71.43
  • 71.42
  • 68.74
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
4.50e3
  • 4.50e3
84.93
  • 84.93
AEIR
  • AEIR
UBERON:2000083ventral mesoderm
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000027Segmentation:20-25 somites
5.27e3
  • 5.27e3
  • 8.96e3
82.35
  • 82.35
  • 70.00
AEIR
  • AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
5.43e3
  • 5.43e3
  • 6.22e3
81.81
  • 81.81
  • 79.16
AEIR
  • AEIR
  • AEIR
UBERON:0010312immature eye
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
5.81e3
  • 5.81e3
  • 7.86e3
  • 7.91e3
  • 8.54e3
80.55
  • 80.55
  • 73.67
  • 73.52
  • 71.41
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003069otic placode
  • ZFS:0000026Segmentation:14-19 somites
6.29e3
  • 6.29e3
78.94
  • 78.94
AEIR
  • AEIR
UBERON:0001017central nervous system
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
6.40e3
  • 6.40e3
  • 6.89e3
  • 6.97e3
  • 7.03e3
  • 7.03e3
  • 7.08e3
  • 7.47e3
78.56
  • 78.56
  • 76.92
  • 76.66
  • 76.46
  • 76.46
  • 76.30
  • 74.99
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001891midbrain
  • ZFS:0000026Segmentation:14-19 somites
6.40e3
  • 6.40e3
78.56
  • 78.56
AEIR
  • AEIR
UBERON:0001049neural tube
  • ZFS:0000026Segmentation:14-19 somites
6.72e3
  • 6.72e3
77.49
  • 77.49
AEIR
  • AEIR
UBERON:0001945superior colliculus
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
7.03e3
  • 7.03e3
  • 7.08e3
  • 7.47e3
  • 7.47e3
  • 7.83e3
  • 7.86e3
  • 7.86e3
76.46
  • 76.46
  • 76.30
  • 74.99
  • 74.99
  • 73.79
  • 73.67
  • 73.67
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
7.15e3
  • 7.15e3
76.06
  • 76.06
AEIR
  • AEIR
UBERON:0006596presumptive blood
  • ZFS:0000027Segmentation:20-25 somites
7.47e3
  • 7.47e3
75.00
  • 75.00
AEIR
  • AEIR
UBERON:0007269pectoral appendage musculature
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
7.47e3
  • 7.47e3
  • 7.47e3
  • 7.86e3
  • 7.86e3
74.99
  • 74.99
  • 74.99
  • 73.67
  • 73.67
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:2001357alar plate midbrain
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
7.47e3
  • 7.47e3
  • 7.86e3
  • 7.86e3
74.99
  • 74.99
  • 73.67
  • 73.67
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002028hindbrain
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
7.83e3
  • 7.83e3
  • 8.22e3
  • 9.07e3
73.79
  • 73.79
  • 72.48
  • 69.62
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001894diencephalon
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
8.30e3
  • 8.30e3
  • 8.79e3
72.21
  • 72.21
  • 70.57
AEIR
  • AEIR
  • AEIR
UBERON:0005886post-hyoid pharyngeal arch skeleton
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
8.65e3
  • 8.65e3
  • 8.65e3
  • 8.79e3
  • 8.79e3
71.04
  • 71.04
  • 71.04
  • 70.57
  • 70.57
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Cross-references

EMBLBC076347, BX548032
EnsemblENSDARG00000025350 (prdx2)
Uniprot/SPTREMBLQ6DGJ6, Q6DGJ6_DANRE
ZFINZDB-GENE-030326-2 (prdx2)

Do not show this banner again