D. rerio Gene: nhlh2 - ENSDARG00000025495 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000025495
Namenhlh2
Descriptionnescient helix loop helix 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1809]
OrganismDanio rerio (zebrafish)
Synonym(s)nscl1, zgc:77245

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.92e3
  • 1.92e3
  • 6.20e3
93.56
  • 93.56
  • 79.24
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
2.59e3
  • 2.59e3
  • 3.17e3
  • 4.26e3
  • 4.58e3
  • 4.60e3
91.34
  • 91.34
  • 89.38
  • 85.72
  • 84.67
  • 84.59
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
2.78e3
  • 2.78e3
  • 1.35e4
90.70
  • 90.70
  • 54.96
AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
2.84e3
  • 2.84e3
90.49
  • 90.49
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
4.17e3
  • 4.17e3
86.05
  • 86.05
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
8.80e3
  • 8.80e3
70.52
  • 70.52
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.37e4
  • 1.37e4
54.06
  • 54.06
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.68e4
  • 1.68e4
43.90
  • 43.90
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
1.70e4
  • 1.70e4
43.01
  • 43.01
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.14e4
  • 2.14e4
28.18
  • 28.18
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.29e4
  • 2.29e4
23.47
  • 23.47
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLBC065689, CR936366
EnsemblENSDARG00000025495 (nhlh2)
Uniprot/SPTREMBLQ6P0A8, Q6P0A8_DANRE
ZFINZDB-GENE-040426-1809 (nhlh2)

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