D. rerio Gene: ndufaf1 - ENSDARG00000025549 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000025549
Namendufaf1
DescriptionNADH dehydrogenase (ubiquinone) complex I, assembly factor 1 [Source:ZFIN;Acc:ZDB-GENE-050306-9]
OrganismDanio rerio (zebrafish)
Synonym(s)fk33c03, wu:fk33c03, zgc:113197
Orthologs(s)16 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
1.17e3
  • 1.17e3
96.09
  • 96.09
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
1.29e3
  • 1.29e3
  • 1.43e3
95.70
  • 95.70
  • 95.20
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.47e3
  • 1.47e3
95.07
  • 95.07
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.59e3
  • 1.59e3
94.68
  • 94.68
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000037Larval:Day 5
2.01e3
  • 2.01e3
  • 3.58e3
  • 3.68e3
  • 5.47e3
93.26
  • 93.26
  • 88.01
  • 87.68
  • 81.69
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.11e3
  • 2.11e3
92.92
  • 92.92
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
2.72e3
  • 2.72e3
90.91
  • 90.91
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.77e3
  • 2.77e3
90.73
  • 90.73
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0004707pharyngula stage
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
2.79e3
  • 2.79e3
  • 3.12e3
  • 3.75e3
  • 3.78e3
  • 3.78e3
  • 3.80e3
  • 3.98e3
  • 5.80e3
  • 5.95e3
  • 7.27e3
90.66
  • 90.66
  • 89.56
  • 87.45
  • 87.35
  • 87.34
  • 87.27
  • 86.68
  • 80.57
  • 80.06
  • 75.67
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
2.87e3
  • 2.87e3
90.41
  • 90.41
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
3.13e3
  • 3.13e3
89.53
  • 89.53
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
3.34e3
  • 3.34e3
88.81
  • 88.81
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
3.40e3
  • 3.40e3
  • 4.37e3
  • 4.65e3
88.62
  • 88.62
  • 85.37
  • 84.43
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
3.44e3
  • 3.44e3
88.50
  • 88.50
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
3.53e3
  • 3.53e3
  • 3.63e3
88.17
  • 88.17
  • 87.84
AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
3.53e3
  • 3.53e3
88.17
  • 88.17
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
3.54e3
  • 3.54e3
88.14
  • 88.14
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
3.54e3
  • 3.54e3
88.14
  • 88.14
AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
3.67e3
  • 3.67e3
87.72
  • 87.72
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000036Larval:Day 4
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000106zygote stage
  • UBERON:0000068embryo stage
  • UBERON:0000066fully formed stage
3.74e3
  • 3.74e3
  • 5.15e3
  • 5.26e3
  • 5.74e3
  • 6.12e3
  • 6.27e3
  • 6.43e3
  • 7.11e3
  • 7.49e3
  • 8.07e3
  • 8.17e3
  • 8.31e3
  • 1.07e4
  • 1.08e4
  • 1.35e4
  • 1.45e4
87.49
  • 87.49
  • 82.76
  • 82.38
  • 80.78
  • 79.51
  • 78.99
  • 78.47
  • 76.18
  • 74.92
  • 72.97
  • 72.66
  • 72.18
  • 64.33
  • 63.84
  • 54.65
  • 51.56
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
3.83e3
  • 3.83e3
87.19
  • 87.19
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
4.17e3
  • 4.17e3
86.03
  • 86.03
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000104life cycle
4.40e3
  • 4.40e3
  • 5.07e3
  • 1.49e4
85.27
  • 85.27
  • 83.02
  • 49.94
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
4.57e3
  • 4.57e3
84.70
  • 84.70
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
4.92e3
  • 4.92e3
83.54
  • 83.54
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
5.76e3
  • 5.76e3
  • 7.12e3
80.70
  • 80.70
  • 76.16
AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • UBERON:0000109gastrula stage
6.42e3
  • 6.42e3
  • 7.62e3
  • 8.18e3
  • 8.68e3
  • 8.70e3
  • 1.05e4
78.51
  • 78.51
  • 74.48
  • 72.63
  • 70.95
  • 70.85
  • 64.75
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
6.63e3
  • 6.63e3
77.79
  • 77.79
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
8.07e3
  • 8.07e3
72.99
  • 72.99
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
9.69e3
  • 9.69e3
  • 1.02e4
  • 1.13e4
  • 1.15e4
  • 1.15e4
67.55
  • 67.55
  • 65.72
  • 62.24
  • 61.58
  • 61.40
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
1.09e4
  • 1.09e4
63.46
  • 63.46
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.11e4
  • 1.11e4
62.69
  • 62.69
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.24e4
  • 1.24e4
58.33
  • 58.33
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Orthologs

Cross-references

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