D. rerio Gene: magi3b - ENSDARG00000025974 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000025974
Namemagi3b
Descriptionmembrane associated guanylate kinase, WW and PDZ domain containing 3b [Source:ZFIN;Acc:ZDB-GENE-060503-301]
OrganismDanio rerio (zebrafish)
Synonym(s)si:ch211-1l10.1
Paralog(s)5 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
6.40e3
  • 6.40e3
78.59
  • 78.59
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
1.14e4
  • 1.14e4
  • 1.30e4
61.83
  • 61.83
  • 56.42
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.31e4
  • 1.31e4
56.17
  • 56.17
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.31e4
  • 1.31e4
56.10
  • 56.10
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.33e4
  • 1.33e4
55.59
  • 55.59
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.48e4
  • 1.48e4
50.37
  • 50.37
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
1.61e4
  • 1.61e4
46.20
  • 46.20
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.61e4
  • 1.61e4
45.95
  • 45.95
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.72e4
  • 1.72e4
  • 1.94e4
42.55
  • 42.55
  • 35.11
AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.73e4
  • 1.73e4
42.22
  • 42.22
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
1.84e4
  • 1.84e4
  • 2.02e4
  • 2.17e4
38.31
  • 38.31
  • 32.48
  • 27.22
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.90e4
  • 1.90e4
36.52
  • 36.52
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.00e4
  • 2.00e4
32.87
  • 32.87
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
2.02e4
  • 2.02e4
32.53
  • 32.53
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Eumetazoa5 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000025974.

Cross-references

EnsemblENSDARG00000025974 (magi3b)
ZFINZDB-GENE-060503-301 (magi3b)
EMBLAL929512, CR391948
Uniprot/SPTREMBLE9QIL2, E9QIL2_DANRE, F1QZE3, F1QZE3_DANRE

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