D. rerio Gene: susd4 - ENSDARG00000026335 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000026335
Namesusd4
Descriptionsushi domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-110511-1]
OrganismDanio rerio (zebrafish)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.69e3
  • 1.69e3
94.34
  • 94.34
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
4.34e3
  • 4.34e3
  • 1.45e4
85.46
  • 85.46
  • 51.34
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
5.86e3
  • 5.86e3
80.37
  • 80.37
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
5.89e3
  • 5.89e3
80.27
  • 80.27
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
9.02e3
  • 9.02e3
69.80
  • 69.80
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
1.09e4
  • 1.09e4
63.53
  • 63.53
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.11e4
  • 1.11e4
62.87
  • 62.87
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.25e4
  • 1.25e4
  • 1.62e4
58.29
  • 58.29
  • 45.61
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.28e4
  • 1.28e4
57.05
  • 57.05
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
1.29e4
  • 1.29e4
  • 1.46e4
  • 1.91e4
  • 2.02e4
  • 2.04e4
56.76
  • 56.76
  • 50.95
  • 35.89
  • 32.32
  • 31.79
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.42e4
  • 1.42e4
52.61
  • 52.61
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.54e4
  • 1.54e4
48.53
  • 48.53
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
1.62e4
  • 1.62e4
45.68
  • 45.68
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.63e4
  • 1.63e4
45.37
  • 45.37
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.71e4
  • 1.71e4
42.60
  • 42.60
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.74e4
  • 1.74e4
  • 1.82e4
41.78
  • 41.78
  • 39.03
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.93e4
  • 1.93e4
35.27
  • 35.27
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.98e4
  • 1.98e4
33.69
  • 33.69
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.20e4
  • 2.20e4
26.47
  • 26.47
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLBX088653
EnsemblENSDARG00000026335 (susd4)
Uniprot/SPTREMBLX1WGF1, X1WGF1_DANRE
Uniprot/SWISSPROTE7FEC4, SUSD4_DANRE
ZFINZDB-GENE-110511-1 (susd4)

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