Gene: hephl1b - ENSDARG00000026403 - Danio rerio (zebrafish)

General information

Ensembl ID	ENSDARG00000026403
Name	hephl1b
Description	hephaestin-like 1b [Source:ZFIN;Acc:ZDB-GENE-091204-388]
Organism	Danio rerio (zebrafish)
Synonym(s)	si:ch73-60g14.1, si:ch73-60g14.3, si:ch73-60g14.4
Paralog(s)	2 paralogs

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0002548	larva	[+] 2 stages UBERON:0000069larval stage ZFS:0000037Larval:Day 5	1.00e4 1.00e4 1.79e4	66.39 66.39 40.12	AEIR AEIR AEIR
UBERON:0000922	embryo	[+] 5 stages ZFS:0000033Hatching:Long-pec UBERON:0000068embryo stage UBERON:0004707pharyngula stage ZFS:0000029Pharyngula:Prim-5 ZFS:0000037Larval:Day 5	1.18e4 1.18e4 1.51e4 1.57e4 1.76e4 2.24e4	60.45 60.45 49.37 47.47 40.96 25.14	AEIR AEIR AEIR AEIR AEIR AEIR
UBERON:0000473	testis	[+] 1 stage UBERON:0000066fully formed stage	1.79e4 1.79e4	40.07 40.07	AEIR AEIR
UBERON:0000014	zone of skin	[+] 1 stage UBERON:0000066fully formed stage	2.03e4 2.03e4	32.02 32.02	AEIR AEIR
UBERON:0000955	brain	[+] 1 stage UBERON:0000066fully formed stage	2.09e4 2.09e4	30.11 30.11	AEIR AEIR
UBERON:0002415	tail	[+] 1 stage UBERON:0000066fully formed stage	2.16e4 2.16e4	27.60 27.60	AEIR AEIR
UBERON:0000033	head	[+] 1 stage UBERON:0000066fully formed stage	2.20e4 2.20e4	26.46 26.46	AEIR AEIR
UBERON:0002107	liver	[+] 1 stage UBERON:0000066fully formed stage	2.28e4 2.28e4	23.60 23.60	AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

RNA-Seq data: Bgee

Sources of raw data:

RNA-Seq data: GEO

Paralogs (same species)

Taxon name	Gene(s)	Expression comparison	See details
Neopterygii	1 gene ENSDARG00000059231 hephl1a	Compare expression	[+]
Chordata	2 genes ENSDARG00000010312 cp ENSDARG00000059231 hephl1a	Compare expression	[+]

Paralogy information comes from OMA : ENSDARG00000026403.

Cross-references

Ensembl	ENSDARG00000026403 (hephl1b)
ZFIN	ZDB-GENE-091204-388 (hephl1b)
EMBL	AL929315, CT573163
Uniprot/SPTREMBL	F1QC68, F1QC68_DANRE, F1QVK8, F1QVK8_DANRE