D. rerio Gene: ccr12b.2 - ENSDARG00000026417 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000026417
Nameccr12b.2
Descriptionchemokine (C-C motif) receptor 12b, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-070301-2]
OrganismDanio rerio (zebrafish)
Synonym(s)ccr12.2, ccr12.2 {eco:0000313|ensembl:ensdarp00000066871,gn eco:0000313|zfin:zdb-gene-070301-2}, ccr12bb, ccr5-35.0%-ek36093, ccr5.2, zfccr3-2
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
3.51e3
  • 3.51e3
88.24
  • 88.24
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
7.14e3
  • 7.14e3
76.09
  • 76.09
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.01e4
  • 1.01e4
66.29
  • 66.29
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.10e4
  • 1.10e4
63.01
  • 63.01
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.58e4
  • 1.58e4
47.06
  • 47.06
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
1.62e4
  • 1.62e4
45.82
  • 45.82
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.78e4
  • 1.78e4
40.37
  • 40.37
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.84e4
  • 1.84e4
38.37
  • 38.37
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.84e4
  • 1.84e4
38.29
  • 38.29
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.93e4
  • 1.93e4
35.54
  • 35.54
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
2.01e4
  • 2.01e4
32.81
  • 32.81
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
2.15e4
  • 2.15e4
  • 2.27e4
  • 2.39e4
28.05
  • 28.05
  • 23.83
  • 19.87
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
2.33e4
  • 2.33e4
22.12
  • 22.12
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Otophysi1 geneCompare expression

Paralogy information comes from OMA : ENSDARG00000026417.

Cross-references

EnsemblENSDARG00000026417 (ccr12b.2)
ZFINZDB-GENE-070301-2 (ccr12b.2)
EMBLBC155846, CU467964
Uniprot/SPTREMBLA9JRY7, A9JRY7_DANRE

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