D. rerio Gene: arhgap12b - ENSDARG00000026482 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000026482
Namearhgap12b
DescriptionRho GTPase activating protein 12b [Source:ZFIN;Acc:ZDB-GENE-040426-1727]
OrganismDanio rerio (zebrafish)
Synonym(s)arhgap12, zgc:73239

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000032Pharyngula:High-pec
1.35e3
  • 1.35e3
  • 1.44e3
  • 3.44e3
  • 4.08e3
  • 1.20e4
95.48
  • 95.48
  • 95.18
  • 88.49
  • 86.33
  • 59.98
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
2.67e3
  • 2.67e3
  • 8.55e3
91.05
  • 91.05
  • 71.38
AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
3.28e3
  • 3.28e3
  • 1.15e4
  • 1.18e4
  • 1.39e4
89.01
  • 89.01
  • 61.34
  • 60.39
  • 53.41
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
3.51e3
  • 3.51e3
88.25
  • 88.25
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
3.64e3
  • 3.64e3
  • 4.80e3
  • 5.41e3
  • 5.52e3
  • 5.67e3
  • 5.86e3
  • 6.64e3
  • 7.21e3
  • 7.21e3
  • 7.34e3
87.82
  • 87.82
  • 83.91
  • 81.89
  • 81.51
  • 81.02
  • 80.37
  • 77.78
  • 75.87
  • 75.86
  • 75.41
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
3.89e3
  • 3.89e3
  • 3.91e3
86.96
  • 86.96
  • 86.90
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
4.94e3
  • 4.94e3
83.46
  • 83.46
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000036Larval:Day 4
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000042Juvenile:Days 30-44
  • UBERON:0000106zygote stage
  • ZFS:0000019Gastrula:Shield
4.94e3
  • 4.94e3
  • 5.16e3
  • 5.32e3
  • 6.71e3
  • 6.78e3
  • 7.03e3
  • 7.91e3
  • 7.99e3
  • 8.08e3
  • 8.12e3
  • 8.21e3
  • 8.45e3
  • 8.49e3
  • 9.86e3
  • 1.02e4
  • 1.07e4
83.45
  • 83.45
  • 82.73
  • 82.20
  • 77.54
  • 77.31
  • 76.46
  • 73.52
  • 73.24
  • 72.93
  • 72.82
  • 72.51
  • 71.71
  • 71.56
  • 67.00
  • 65.77
  • 64.22
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
5.01e3
  • 5.01e3
83.24
  • 83.24
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
5.28e3
  • 5.28e3
82.32
  • 82.32
AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
5.33e3
  • 5.33e3
82.17
  • 82.17
AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
5.98e3
  • 5.98e3
  • 5.98e3
  • 6.22e3
  • 6.97e3
  • 9.13e3
79.99
  • 79.99
  • 79.99
  • 79.16
  • 76.66
  • 69.43
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • UBERON:0000109gastrula stage
  • ZFS:0000019Gastrula:Shield
6.24e3
  • 6.24e3
  • 7.29e3
  • 7.61e3
  • 7.81e3
  • 1.06e4
  • 1.09e4
79.11
  • 79.11
  • 75.58
  • 74.51
  • 73.84
  • 64.66
  • 63.60
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
6.28e3
  • 6.28e3
78.99
  • 78.99
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
6.35e3
  • 6.35e3
78.75
  • 78.75
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
6.98e3
  • 6.98e3
76.64
  • 76.64
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
7.22e3
  • 7.22e3
  • 7.24e3
  • 8.00e3
75.83
  • 75.83
  • 75.76
  • 73.23
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
7.24e3
  • 7.24e3
75.77
  • 75.77
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
8.27e3
  • 8.27e3
72.33
  • 72.33
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000015Blastula:Dome
8.41e3
  • 8.41e3
  • 8.78e3
  • 9.61e3
  • 9.83e3
  • 9.83e3
71.85
  • 71.85
  • 70.61
  • 67.82
  • 67.09
  • 67.08
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
8.51e3
  • 8.51e3
71.49
  • 71.49
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
8.72e3
  • 8.72e3
70.81
  • 70.81
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
9.15e3
  • 9.15e3
69.35
  • 69.35
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
9.50e3
  • 9.50e3
  • 1.32e4
68.19
  • 68.19
  • 55.93
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
9.54e3
  • 9.54e3
68.06
  • 68.06
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.04e4
  • 1.04e4
65.27
  • 65.27
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.07e4
  • 1.07e4
64.15
  • 64.15
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.22e4
  • 1.22e4
59.21
  • 59.21
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.30e4
  • 1.30e4
56.41
  • 56.41
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.32e4
  • 1.32e4
55.97
  • 55.97
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.36e4
  • 1.36e4
54.49
  • 54.49
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.44e4
  • 1.44e4
51.62
  • 51.62
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

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