D. rerio Gene: khsrp - ENSDARG00000026489 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000026489
Namekhsrp
DescriptionKH-type splicing regulatory protein [Source:ZFIN;Acc:ZDB-GENE-030131-4357]
OrganismDanio rerio (zebrafish)
Synonym(s)fc10e10, fc94c12, wu:fb25b12, wu:fc10e10, wu:fc94c12, zgc:163038
Paralog(s)50 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
149
  • 149
99.50
  • 99.50
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
161
  • 161
99.46
  • 99.46
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
190
  • 190
  • 196
  • 422
  • 5.10e3
  • 5.41e3
99.37
  • 99.37
  • 99.35
  • 98.59
  • 82.93
  • 81.90
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000022Gastrula:Bud
  • UBERON:0000109gastrula stage
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
290
  • 290
  • 293
  • 415
  • 435
  • 457
  • 550
99.03
  • 99.03
  • 99.02
  • 98.61
  • 98.55
  • 98.47
  • 98.16
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000037Larval:Day 5
  • ZFS:0000036Larval:Day 4
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000027Segmentation:20-25 somites
  • UBERON:0004707pharyngula stage
  • UBERON:00072322 cell stage
  • UBERON:00072334 cell stage
  • UBERON:00072368 cell stage
  • ZFS:0000006Cleavage:32-cell
  • ZFS:0000007Cleavage:64-cell
  • ZFS:0000008Blastula:128-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000010Blastula:512-cell
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000012Blastula:High
  • ZFS:0000013Blastula:Oblong
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000005Cleavage:16-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000016Blastula:30%-epiboly
  • UBERON:0000104life cycle
  • UBERON:0000066fully formed stage
  • UBERON:0000068embryo stage
333
  • 333
  • 580
  • 584
  • 644
  • 701
  • 805
  • 831
  • 1.21e3
  • 1.47e3
  • 2.03e3
  • 2.28e3
  • 2.49e3
  • 2.56e3
  • 2.60e3
  • 6.40e3
  • 8.30e3
  • 8.40e3
  • 8.79e3
  • 8.96e3
  • 9.51e3
  • 9.51e3
  • 9.51e3
  • 9.51e3
  • 9.51e3
  • 9.51e3
  • 9.51e3
  • 9.51e3
  • 9.51e3
  • 9.51e3
  • 9.51e3
  • 9.51e3
  • 9.51e3
  • 9.67e3
  • 9.96e3
  • 9.96e3
  • 1.10e4
  • 1.10e4
  • 1.41e4
  • 1.45e4
  • 1.45e4
98.89
  • 98.89
  • 98.06
  • 98.05
  • 97.85
  • 97.66
  • 97.31
  • 97.22
  • 95.94
  • 95.09
  • 93.22
  • 92.37
  • 91.65
  • 91.43
  • 91.30
  • 78.56
  • 72.21
  • 71.86
  • 70.58
  • 69.99
  • 68.17
  • 68.17
  • 68.17
  • 68.17
  • 68.17
  • 68.17
  • 68.17
  • 68.17
  • 68.17
  • 68.17
  • 68.17
  • 68.17
  • 68.17
  • 67.63
  • 66.66
  • 66.66
  • 63.32
  • 63.32
  • 52.86
  • 51.56
  • 51.42
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000030Pharyngula:Prim-15
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
432
  • 432
  • 540
  • 560
  • 867
  • 996
  • 1.24e3
  • 1.28e3
  • 1.49e3
  • 2.47e3
  • 4.29e3
98.56
  • 98.56
  • 98.20
  • 98.13
  • 97.10
  • 96.67
  • 95.84
  • 95.71
  • 95.02
  • 91.74
  • 85.65
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
578
  • 578
98.07
  • 98.07
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
582
  • 582
98.05
  • 98.05
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
605
  • 605
97.98
  • 97.98
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
732
  • 732
  • 995
  • 6.97e3
  • 7.08e3
97.55
  • 97.55
  • 96.67
  • 76.65
  • 76.28
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
813
  • 813
97.28
  • 97.28
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
1.75e3
  • 1.75e3
  • 2.98e3
94.15
  • 94.15
  • 90.02
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.83e3
  • 1.83e3
  • 3.84e3
93.88
  • 93.88
  • 87.14
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
1.88e3
  • 1.88e3
  • 4.99e3
93.71
  • 93.71
  • 83.30
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
1.94e3
  • 1.94e3
  • 1.99e3
  • 3.15e3
93.51
  • 93.51
  • 93.34
  • 89.45
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
2.07e3
  • 2.07e3
  • 6.49e3
93.09
  • 93.09
  • 78.27
AEIR
  • AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
2.19e3
  • 2.19e3
92.67
  • 92.67
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
2.27e3
  • 2.27e3
92.39
  • 92.39
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
2.57e3
  • 2.57e3
91.41
  • 91.41
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
2.81e3
  • 2.81e3
90.61
  • 90.61
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
2.92e3
  • 2.92e3
90.23
  • 90.23
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
3.43e3
  • 3.43e3
88.51
  • 88.51
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
3.47e3
  • 3.47e3
88.39
  • 88.39
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
3.55e3
  • 3.55e3
88.10
  • 88.10
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
3.74e3
  • 3.74e3
87.48
  • 87.48
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
3.94e3
  • 3.94e3
86.83
  • 86.83
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
3.95e3
  • 3.95e3
86.76
  • 86.76
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
4.89e3
  • 4.89e3
83.62
  • 83.62
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
4.99e3
  • 4.99e3
83.29
  • 83.29
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
5.46e3
  • 5.46e3
81.72
  • 81.72
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
5.51e3
  • 5.51e3
81.56
  • 81.56
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Chordata2 genesCompare expression
Opisthokonta50 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000026489.

Cross-references

EnsemblENSDARG00000026489 (khsrp)
ZFINZDB-GENE-030131-4357 (khsrp)
EMBLAL929150
Uniprot/SPTREMBLE9QIA6, E9QIA6_DANRE, F1QXP8, F1QXP8_DANRE, H0WEH3, H0WEH3_DANRE

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