D. rerio Gene: ppm1e - ENSDARG00000026499 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000026499
Nameppm1e
Descriptionprotein phosphatase, Mg2+/Mn2+ dependent, 1E [Source:ZFIN;Acc:ZDB-GENE-070326-2]
OrganismDanio rerio (zebrafish)
Synonym(s)camkp-n

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
3.38e3
  • 3.38e3
88.70
  • 88.70
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
5.67e3
  • 5.67e3
  • 1.26e4
81.01
  • 81.01
  • 57.77
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
8.02e3
  • 8.02e3
73.14
  • 73.14
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
8.51e3
  • 8.51e3
  • 9.15e3
71.50
  • 71.50
  • 69.38
AEIR
  • AEIR
  • AEIR
UBERON:0002037cerebellum
  • ZFS:0000033Hatching:Long-pec
1.17e4
  • 1.17e4
60.70
  • 60.70
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
1.24e4
  • 1.24e4
  • 1.28e4
  • 1.50e4
  • 1.86e4
  • 1.96e4
58.56
  • 58.56
  • 57.22
  • 49.67
  • 37.78
  • 34.26
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001905pineal body
  • ZFS:0000033Hatching:Long-pec
1.26e4
  • 1.26e4
57.87
  • 57.87
AEIR
  • AEIR
UBERON:0001893telencephalon
  • ZFS:0000033Hatching:Long-pec
1.33e4
  • 1.33e4
55.53
  • 55.53
AEIR
  • AEIR
UBERON:0002240spinal cord
  • ZFS:0000033Hatching:Long-pec
1.34e4
  • 1.34e4
55.24
  • 55.24
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.43e4
  • 1.43e4
52.05
  • 52.05
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.45e4
  • 1.45e4
51.29
  • 51.29
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • UBERON:0000066fully formed stage
1.50e4
  • 1.50e4
49.94
  • 49.94
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.55e4
  • 1.55e4
  • 1.94e4
48.21
  • 48.21
  • 35.19
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.56e4
  • 1.56e4
47.62
  • 47.62
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.60e4
  • 1.60e4
46.58
  • 46.58
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.64e4
  • 1.64e4
45.11
  • 45.11
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.76e4
  • 1.76e4
41.14
  • 41.14
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.87e4
  • 1.87e4
37.41
  • 37.41
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.88e4
  • 1.88e4
37.11
  • 37.11
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.91e4
  • 1.91e4
36.15
  • 36.15
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.10e4
  • 2.10e4
29.77
  • 29.77
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • EST data: UniGene
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Cross-references

EMBLAL935293, CR855192
EnsemblENSDARG00000026499 (ppm1e)
Uniprot/SPTREMBLF1R3T2, F1R3T2_DANRE
ZFINZDB-GENE-070326-2 (ppm1e)

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