D. rerio Gene: ppp4r2a - ENSDARG00000026540 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000026540
Nameppp4r2a
Descriptionprotein phosphatase 4, regulatory subunit 2a [Source:ZFIN;Acc:ZDB-GENE-030131-4922]
OrganismDanio rerio (zebrafish)
Synonym(s)fe11b04, ppp4r2, wu:fe11b04

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
712
  • 712
  • 722
  • 1.17e3
  • 1.56e3
  • 1.78e3
97.62
  • 97.62
  • 97.59
  • 96.08
  • 94.76
  • 94.03
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
740
  • 740
97.52
  • 97.52
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000036Larval:Day 4
  • ZFS:0000037Larval:Day 5
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000040Larval:Days 14-20
  • UBERON:0000068embryo stage
  • UBERON:0000066fully formed stage
773
  • 773
  • 2.21e3
  • 3.25e3
  • 3.80e3
  • 3.83e3
  • 4.03e3
  • 4.09e3
  • 4.38e3
  • 4.61e3
  • 5.21e3
  • 7.26e3
  • 7.29e3
  • 7.58e3
  • 8.13e3
  • 1.44e4
  • 1.47e4
97.41
  • 97.41
  • 92.62
  • 89.11
  • 87.28
  • 87.17
  • 86.52
  • 86.30
  • 85.34
  • 84.57
  • 82.55
  • 75.71
  • 75.59
  • 74.62
  • 72.77
  • 51.82
  • 50.68
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.19e3
  • 1.19e3
96.02
  • 96.02
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.54e3
  • 1.54e3
94.85
  • 94.85
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000017Gastrula:50%-epiboly
  • UBERON:0000109gastrula stage
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
2.06e3
  • 2.06e3
  • 2.54e3
  • 2.98e3
  • 3.32e3
  • 3.80e3
  • 4.16e3
93.10
  • 93.10
  • 91.51
  • 90.03
  • 88.90
  • 87.27
  • 86.06
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
2.42e3
  • 2.42e3
  • 2.49e3
  • 2.58e3
  • 1.09e4
91.91
  • 91.91
  • 91.66
  • 91.37
  • 63.58
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
2.49e3
  • 2.49e3
91.67
  • 91.67
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • ZFS:0000024Segmentation:5-9 somites
  • UBERON:0004707pharyngula stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000037Larval:Day 5
3.52e3
  • 3.52e3
  • 3.99e3
  • 4.13e3
  • 4.56e3
  • 6.02e3
  • 6.07e3
  • 6.09e3
  • 6.14e3
  • 6.43e3
  • 8.30e3
88.22
  • 88.22
  • 86.64
  • 86.17
  • 84.72
  • 79.84
  • 79.68
  • 79.59
  • 79.44
  • 78.46
  • 72.20
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
4.79e3
  • 4.79e3
  • 7.93e3
83.97
  • 83.97
  • 73.44
AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
4.89e3
  • 4.89e3
83.62
  • 83.62
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
5.20e3
  • 5.20e3
82.58
  • 82.58
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
5.37e3
  • 5.37e3
82.04
  • 82.04
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
5.42e3
  • 5.42e3
  • 5.49e3
81.86
  • 81.86
  • 81.63
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
5.55e3
  • 5.55e3
81.41
  • 81.41
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
6.08e3
  • 6.08e3
  • 7.32e3
79.64
  • 79.64
  • 75.49
AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
6.15e3
  • 6.15e3
79.41
  • 79.41
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
6.37e3
  • 6.37e3
  • 6.95e3
  • 8.26e3
78.67
  • 78.67
  • 76.72
  • 72.35
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
6.47e3
  • 6.47e3
78.35
  • 78.35
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
  • ZFS:0000035Larval:Protruding-mouth
6.52e3
  • 6.52e3
  • 8.04e3
  • 1.21e4
78.18
  • 78.18
  • 73.10
  • 59.59
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
6.59e3
  • 6.59e3
77.93
  • 77.93
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
6.90e3
  • 6.90e3
76.91
  • 76.91
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
6.90e3
  • 6.90e3
76.90
  • 76.90
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
6.91e3
  • 6.91e3
76.88
  • 76.88
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
7.12e3
  • 7.12e3
76.16
  • 76.16
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
7.45e3
  • 7.45e3
75.06
  • 75.06
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
7.83e3
  • 7.83e3
73.79
  • 73.79
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
7.85e3
  • 7.85e3
73.71
  • 73.71
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
8.15e3
  • 8.15e3
72.70
  • 72.70
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
8.36e3
  • 8.36e3
72.00
  • 72.00
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
1.05e4
  • 1.05e4
64.90
  • 64.90
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.06e4
  • 1.06e4
64.38
  • 64.38
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Cross-references

EMBLCT027567
EnsemblENSDARG00000026540 (ppp4r2a)
Uniprot/SPTREMBLF1QCN7, F1QCN7_DANRE
ZFINZDB-GENE-030131-4922 (ppp4r2a)

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