D. rerio Gene: tmem41ab - ENSDARG00000026771 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000026771
Nametmem41ab
Descriptiontransmembrane protein 41ab [Source:ZFIN;Acc:ZDB-GENE-040426-2050]
OrganismDanio rerio (zebrafish)
Synonym(s)q1ly83, tmem41a, zgc:85616
Orthologs(s)22 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
534
  • 534
98.22
  • 98.22
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
812
  • 812
97.28
  • 97.28
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.38e3
  • 1.38e3
95.39
  • 95.39
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
6.59e3
  • 6.59e3
77.92
  • 77.92
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
6.81e3
  • 6.81e3
  • 1.13e4
77.21
  • 77.21
  • 62.20
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
7.47e3
  • 7.47e3
74.98
  • 74.98
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
7.72e3
  • 7.72e3
  • 1.30e4
  • 1.60e4
  • 1.70e4
  • 1.81e4
74.14
  • 74.14
  • 56.60
  • 46.54
  • 43.04
  • 39.56
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.06e4
  • 1.06e4
64.65
  • 64.65
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.30e4
  • 1.30e4
56.45
  • 56.45
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.77e4
  • 1.77e4
40.87
  • 40.87
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
1.87e4
  • 1.87e4
37.42
  • 37.42
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi19 species20 genesCompare expression
Bilateria20 species22 genesCompare expression

Orthology information comes from OMA : ENSDARG00000026771.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata1 geneCompare expression
Eukaryota2 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000026771.

Cross-references

EnsemblENSDARG00000026771 (tmem41ab)
ZFINZDB-GENE-040426-2050 (tmem41ab)
EMBLBC068328, BX088533, CR382370
Uniprot/SWISSPROTQ6NV38, T41AB_DANRE

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