D. rerio Gene: grm1a - ENSDARG00000026796 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000026796
Namegrm1a
Descriptionglutamate receptor, metabotropic 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7893]
OrganismDanio rerio (zebrafish)
Synonym(s)f1q6y9, fj39d05, si:ch211-51a19.1, wu:fj39d05
Orthologs(s)25 orthologs
Paralog(s)12 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
2.35e3
  • 2.35e3
  • 1.80e4
92.13
  • 92.13
  • 39.85
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
6.16e3
  • 6.16e3
  • 1.10e4
79.37
  • 79.37
  • 63.18
AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000037Larval:Day 5
  • ZFS:0000036Larval:Day 4
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000033Hatching:Long-pec
6.32e3
  • 6.32e3
  • 1.39e4
  • 1.40e4
  • 1.70e4
  • 1.81e4
78.84
  • 78.84
  • 53.43
  • 53.21
  • 42.97
  • 39.42
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000203pallium
  • ZFS:0000037Larval:Day 5
7.47e3
  • 7.47e3
75.00
  • 75.00
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
9.26e3
  • 9.26e3
  • 1.63e4
  • 1.81e4
  • 2.18e4
  • 2.28e4
68.99
  • 68.99
  • 45.29
  • 39.34
  • 26.85
  • 23.73
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
9.85e3
  • 9.85e3
  • 1.07e4
67.02
  • 67.02
  • 64.23
AEIR
  • AEIR
  • AEIR
UBERON:0001792ganglionic layer of retina
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
1.07e4
  • 1.07e4
  • 1.28e4
64.28
  • 64.28
  • 57.14
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.11e4
  • 1.11e4
  • 1.25e4
  • 1.49e4
62.82
  • 62.82
  • 58.11
  • 50.12
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002264olfactory bulb
  • ZFS:0000035Larval:Protruding-mouth
1.12e4
  • 1.12e4
62.50
  • 62.50
AEIR
  • AEIR
UBERON:0001791inner nuclear layer of retina
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
1.16e4
  • 1.16e4
  • 1.36e4
61.10
  • 61.10
  • 54.53
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.17e4
  • 1.17e4
60.79
  • 60.79
AEIR
  • AEIR
UBERON:0000204ventral part of telencephalon
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
1.49e4
  • 1.49e4
  • 1.49e4
50.00
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
UBERON:0004703dorsal thalamus
  • ZFS:0000037Larval:Day 5
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:2000188corpus cerebelli
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000037Larval:Day 5
1.49e4
  • 1.49e4
  • 1.49e4
50.00
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
UBERON:2000372interpeduncular nucleus medulla oblongata
  • ZFS:0000037Larval:Day 5
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:2000603valvula cerebelli
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000037Larval:Day 5
1.49e4
  • 1.49e4
  • 1.49e4
50.00
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
ZFA:0006000intermediate hypothalamus (Danio)
  • ZFS:0000037Larval:Day 5
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:2000633caudal tuberculum
  • ZFS:0000037Larval:Day 5
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.62e4
  • 1.62e4
45.65
  • 45.65
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.68e4
  • 1.68e4
43.83
  • 43.83
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.70e4
  • 1.70e4
43.06
  • 43.06
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
1.73e4
  • 1.73e4
42.13
  • 42.13
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.78e4
  • 1.78e4
40.40
  • 40.40
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.81e4
  • 1.81e4
39.56
  • 39.56
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.86e4
  • 1.86e4
37.66
  • 37.66
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.01e4
  • 2.01e4
32.74
  • 32.74
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
2.04e4
  • 2.04e4
31.71
  • 31.71
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi19 species19 genesCompare expression
Bilateria24 species25 genesCompare expression

Orthology information comes from OMA : ENSDARG00000026796.

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Neopterygii1 geneCompare expression
Chordata12 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000026796.

Cross-references

EnsemblENSDARG00000026796 (grm1a)
ZFINZDB-GENE-030131-7893 (grm1a)
EMBLBX510959, BX649393, KF234081
Uniprot/SPTREMBLQ5TZ45, Q5TZ45_DANRE, U3N859, U3N859_DANRE

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