D. rerio Gene: gc3 - ENSDARG00000026820 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000026820
Namegc3
Descriptionguanylyl cyclase 3 [Source:ZFIN;Acc:ZDB-GENE-011128-9]
OrganismDanio rerio (zebrafish)
Synonym(s)gucy2d1, retgc-3, zat, zatoichi

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
  • ZFS:0000035Larval:Protruding-mouth
369
  • 369
  • 8.51e3
  • 1.39e4
98.77
  • 98.77
  • 71.51
  • 53.31
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
3.15e3
  • 3.15e3
  • 3.38e3
89.46
  • 89.46
  • 88.69
AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
4.18e3
  • 4.18e3
86.02
  • 86.02
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
5.49e3
  • 5.49e3
  • 1.78e4
  • 1.82e4
  • 2.01e4
  • 2.08e4
  • 2.20e4
81.62
  • 81.62
  • 40.40
  • 39.05
  • 32.71
  • 30.45
  • 26.45
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
8.02e3
  • 8.02e3
  • 1.16e4
  • 1.58e4
73.15
  • 73.15
  • 61.30
  • 46.94
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
8.23e3
  • 8.23e3
72.45
  • 72.45
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000037Larval:Day 5
  • ZFS:0000036Larval:Day 4
  • ZFS:0000040Larval:Days 14-20
  • UBERON:0000066fully formed stage
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
9.21e3
  • 9.21e3
  • 1.04e4
  • 1.30e4
  • 1.47e4
  • 1.66e4
  • 1.78e4
  • 1.78e4
  • 1.79e4
  • 1.81e4
69.15
  • 69.15
  • 65.09
  • 56.44
  • 50.68
  • 44.48
  • 40.56
  • 40.38
  • 40.18
  • 39.42
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
9.48e3
  • 9.48e3
68.26
  • 68.26
AEIR
  • AEIR
UBERON:0001789outer nuclear layer of retina
  • ZFS:0000035Larval:Protruding-mouth
1.07e4
  • 1.07e4
64.28
  • 64.28
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
1.38e4
  • 1.38e4
  • 1.53e4
53.70
  • 53.70
  • 48.79
AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000109gastrula stage
  • ZFS:0000022Gastrula:Bud
1.44e4
  • 1.44e4
  • 1.51e4
  • 1.59e4
51.88
  • 51.88
  • 49.52
  • 46.90
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.50e4
  • 1.50e4
49.79
  • 49.79
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.69e4
  • 1.69e4
43.54
  • 43.54
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.70e4
  • 1.70e4
42.94
  • 42.94
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.71e4
  • 1.71e4
42.82
  • 42.82
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
1.77e4
  • 1.77e4
40.77
  • 40.77
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.86e4
  • 1.86e4
37.66
  • 37.66
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.95e4
  • 1.95e4
34.64
  • 34.64
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.03e4
  • 2.03e4
32.02
  • 32.02
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
2.19e4
  • 2.19e4
26.68
  • 26.68
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.52e4
  • 2.52e4
15.64
  • 15.64
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EMBLBX294181
EnsemblENSDARG00000026820 (gc3)
Uniprot/SPTREMBLA2BFQ0, A2BFQ0_DANRE, F1QSL9, F1QSL9_DANRE
ZFINZDB-GENE-011128-9 (gc3)

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