D. rerio Gene: uchl1 - ENSDARG00000026871 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000026871
Nameuchl1
Descriptionubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase) [Source:ZFIN;Acc:ZDB-GENE-030131-3844]
OrganismDanio rerio (zebrafish)
Synonym(s)cb358, wu:fc55h08

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000307blastula
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000015Blastula:Dome
36.6
  • 36.6
  • 41.0
  • 387
  • 543
  • 1.22e3
99.88
  • 99.88
  • 99.87
  • 98.71
  • 98.19
  • 95.92
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
119
  • 119
99.61
  • 99.61
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
155
  • 155
99.49
  • 99.49
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
379
  • 379
98.73
  • 98.73
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
417
  • 417
98.61
  • 98.61
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
483
  • 483
98.39
  • 98.39
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000037Larval:Day 5
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000036Larval:Day 4
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000026Segmentation:14-19 somites
488
  • 488
  • 2.63e3
  • 5.69e3
  • 6.20e3
  • 6.51e3
  • 8.05e3
  • 8.47e3
  • 9.32e3
  • 9.85e3
  • 1.01e4
  • 1.02e4
  • 1.18e4
  • 1.21e4
  • 1.35e4
98.37
  • 98.37
  • 91.19
  • 80.95
  • 79.23
  • 78.20
  • 73.04
  • 71.63
  • 68.80
  • 67.01
  • 66.08
  • 65.95
  • 60.45
  • 59.43
  • 54.85
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
572
  • 572
98.09
  • 98.09
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
747
  • 747
  • 7.69e3
  • 1.03e4
  • 1.65e4
97.50
  • 97.50
  • 74.26
  • 65.52
  • 44.78
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
766
  • 766
97.44
  • 97.44
AEIR
  • AEIR
UBERON:0000004nose
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
879
  • 879
  • 934
  • 5.27e3
  • 5.27e3
97.06
  • 97.06
  • 96.88
  • 82.35
  • 82.35
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001714cranial ganglion
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
934
  • 934
  • 996
  • 996
  • 1.07e3
  • 1.24e3
  • 3.20e3
  • 3.20e3
96.88
  • 96.88
  • 96.67
  • 96.67
  • 96.43
  • 95.84
  • 89.28
  • 89.28
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
979
  • 979
  • 8.17e3
96.73
  • 96.73
  • 72.65
AEIR
  • AEIR
  • AEIR
UBERON:0001890forebrain
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000030Pharyngula:Prim-15
996
  • 996
  • 1.07e3
  • 3.45e3
  • 4.60e3
96.67
  • 96.67
  • 96.43
  • 88.46
  • 84.61
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001675trigeminal ganglion
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000030Pharyngula:Prim-15
1.24e3
  • 1.24e3
  • 1.36e3
  • 1.49e3
  • 1.87e3
  • 2.13e3
  • 2.99e3
  • 3.32e3
95.84
  • 95.84
  • 95.46
  • 95.00
  • 93.75
  • 92.86
  • 90.00
  • 88.89
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:2000120lateral line ganglion
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
1.24e3
  • 1.24e3
  • 1.24e3
  • 1.66e3
  • 1.66e3
  • 1.66e3
  • 1.87e3
  • 1.87e3
95.84
  • 95.84
  • 95.84
  • 94.45
  • 94.45
  • 94.45
  • 93.75
  • 93.75
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.35e3
  • 1.35e3
95.48
  • 95.48
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.41e3
  • 1.41e3
95.28
  • 95.28
AEIR
  • AEIR
UBERON:0002028hindbrain
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000030Pharyngula:Prim-15
1.49e3
  • 1.49e3
  • 2.36e3
  • 3.90e3
  • 4.48e3
95.00
  • 95.00
  • 92.10
  • 86.95
  • 84.99
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
1.57e3
  • 1.57e3
  • 1.76e3
  • 2.24e3
  • 2.24e3
  • 3.74e3
  • 4.75e3
  • 4.75e3
94.74
  • 94.74
  • 94.12
  • 92.50
  • 92.50
  • 87.49
  • 84.08
  • 84.08
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001894diencephalon
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
1.66e3
  • 1.66e3
  • 1.76e3
  • 2.36e3
  • 2.60e3
  • 3.11e3
  • 5.85e3
  • 6.11e3
94.44
  • 94.44
  • 94.12
  • 92.10
  • 91.30
  • 89.58
  • 80.42
  • 79.53
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001943midbrain tegmentum
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
1.66e3
  • 1.66e3
  • 1.87e3
  • 1.87e3
  • 2.64e3
  • 2.64e3
  • 4.67e3
  • 5.27e3
94.44
  • 94.44
  • 93.75
  • 93.75
  • 91.17
  • 91.17
  • 84.37
  • 82.35
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.83e3
  • 1.83e3
93.87
  • 93.87
AEIR
  • AEIR
UBERON:0001891midbrain
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
1.99e3
  • 1.99e3
  • 2.13e3
  • 3.32e3
  • 3.52e3
93.33
  • 93.33
  • 92.86
  • 88.89
  • 88.23
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
2.19e3
  • 2.19e3
  • 2.42e3
92.66
  • 92.66
  • 91.91
AEIR
  • AEIR
  • AEIR
CL:0000540neuron
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
2.24e3
  • 2.24e3
  • 2.24e3
  • 2.72e3
  • 2.99e3
  • 3.20e3
92.50
  • 92.50
  • 92.50
  • 90.91
  • 90.00
  • 89.28
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001049neural tube
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000026Segmentation:14-19 somites
2.24e3
  • 2.24e3
  • 2.24e3
  • 2.60e3
  • 8.96e3
92.50
  • 92.50
  • 92.50
  • 91.30
  • 69.98
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0010285midbrain basal plate
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
2.64e3
  • 2.64e3
  • 2.64e3
  • 2.64e3
91.17
  • 91.17
  • 91.17
  • 91.17
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000109gastrula stage
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
2.91e3
  • 2.91e3
  • 3.78e3
  • 5.28e3
  • 6.02e3
  • 9.70e3
  • 1.30e4
90.25
  • 90.25
  • 87.36
  • 82.32
  • 79.85
  • 67.52
  • 56.48
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
2.98e3
  • 2.98e3
90.02
  • 90.02
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
3.78e3
  • 3.78e3
87.36
  • 87.36
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
4.24e3
  • 4.24e3
  • 6.30e3
  • 7.22e3
  • 7.96e3
  • 8.59e3
  • 9.40e3
  • 1.02e4
  • 1.38e4
  • 1.40e4
  • 1.41e4
85.80
  • 85.80
  • 78.92
  • 75.83
  • 73.35
  • 71.24
  • 68.53
  • 65.95
  • 53.66
  • 53.17
  • 52.92
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
4.30e3
  • 4.30e3
85.61
  • 85.61
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
4.52e3
  • 4.52e3
84.86
  • 84.86
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
4.56e3
  • 4.56e3
84.75
  • 84.75
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
4.69e3
  • 4.69e3
84.31
  • 84.31
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
5.61e3
  • 5.61e3
  • 6.40e3
  • 6.53e3
81.23
  • 81.23
  • 78.59
  • 78.13
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
6.36e3
  • 6.36e3
78.72
  • 78.72
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
6.97e3
  • 6.97e3
76.65
  • 76.65
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
7.44e3
  • 7.44e3
75.08
  • 75.08
AEIR
  • AEIR
UBERON:0003070trigeminal placode complex
  • ZFS:0000026Segmentation:14-19 somites
7.47e3
  • 7.47e3
74.99
  • 74.99
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
7.72e3
  • 7.72e3
  • 8.32e3
74.15
  • 74.15
  • 72.15
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
8.36e3
  • 8.36e3
71.99
  • 71.99
AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
8.96e3
  • 8.96e3
  • 1.14e4
  • 1.20e4
  • 1.23e4
  • 1.25e4
  • 1.25e4
  • 1.25e4
  • 1.27e4
69.99
  • 69.99
  • 61.88
  • 59.98
  • 58.80
  • 58.31
  • 58.31
  • 58.31
  • 57.47
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
9.50e3
  • 9.50e3
68.21
  • 68.21
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.04e4
  • 1.04e4
65.25
  • 65.25
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.24e4
  • 1.24e4
58.63
  • 58.63
AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.65e4
  • 1.65e4
44.73
  • 44.73
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.66e4
  • 1.66e4
44.55
  • 44.55
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

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