D. rerio Gene: fam57ba - ENSDARG00000026875 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000026875
Namefam57ba
Descriptionfamily with sequence similarity 57, member Ba [Source:ZFIN;Acc:ZDB-GENE-030131-2046]
OrganismDanio rerio (zebrafish)
Synonym(s)fb95d07, wu:fb95d07, zgc:73225
Orthologs(s)15 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000036Larval:Day 4
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000022Gastrula:Bud
1.06e3
  • 1.06e3
  • 2.42e3
  • 4.85e3
  • 5.14e3
  • 5.33e3
  • 6.07e3
  • 7.91e3
  • 8.31e3
  • 8.69e3
  • 9.13e3
  • 1.05e4
  • 1.06e4
  • 1.07e4
  • 1.08e4
96.46
  • 96.46
  • 91.91
  • 83.75
  • 82.78
  • 82.16
  • 79.67
  • 73.52
  • 72.18
  • 70.90
  • 69.43
  • 64.91
  • 64.65
  • 64.24
  • 63.67
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000029Pharyngula:Prim-5
1.73e3
  • 1.73e3
  • 8.47e3
  • 1.34e4
94.22
  • 94.22
  • 71.64
  • 54.99
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
1.80e3
  • 1.80e3
  • 4.84e3
  • 6.28e3
  • 6.88e3
93.98
  • 93.98
  • 83.79
  • 78.96
  • 76.97
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
2.65e3
  • 2.65e3
91.12
  • 91.12
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
2.72e3
  • 2.72e3
  • 5.81e3
  • 5.87e3
  • 8.37e3
  • 8.85e3
  • 9.00e3
  • 1.11e4
  • 1.19e4
  • 1.19e4
  • 1.29e4
90.88
  • 90.88
  • 80.54
  • 80.34
  • 71.99
  • 70.35
  • 69.85
  • 62.70
  • 60.19
  • 60.06
  • 56.77
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
2.78e3
  • 2.78e3
90.69
  • 90.69
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
2.80e3
  • 2.80e3
  • 2.84e3
90.63
  • 90.63
  • 90.48
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
3.43e3
  • 3.43e3
88.53
  • 88.53
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000016Blastula:30%-epiboly
3.81e3
  • 3.81e3
  • 7.00e3
  • 7.13e3
  • 7.14e3
  • 9.15e3
87.23
  • 87.23
  • 76.55
  • 76.12
  • 76.09
  • 69.38
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
4.23e3
  • 4.23e3
85.84
  • 85.84
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
4.43e3
  • 4.43e3
  • 5.13e3
  • 5.38e3
85.18
  • 85.18
  • 82.81
  • 81.98
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
4.64e3
  • 4.64e3
84.46
  • 84.46
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
5.63e3
  • 5.63e3
81.15
  • 81.15
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
5.75e3
  • 5.75e3
80.75
  • 80.75
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
5.79e3
  • 5.79e3
  • 6.07e3
80.60
  • 80.60
  • 79.67
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
6.01e3
  • 6.01e3
79.88
  • 79.88
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
6.07e3
  • 6.07e3
79.67
  • 79.67
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
6.64e3
  • 6.64e3
77.76
  • 77.76
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
6.71e3
  • 6.71e3
77.52
  • 77.52
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
7.13e3
  • 7.13e3
76.13
  • 76.13
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
7.84e3
  • 7.84e3
73.75
  • 73.75
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
8.03e3
  • 8.03e3
73.12
  • 73.12
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
8.25e3
  • 8.25e3
72.39
  • 72.39
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
8.51e3
  • 8.51e3
71.50
  • 71.50
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • UBERON:0000109gastrula stage
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
8.61e3
  • 8.61e3
  • 1.08e4
  • 1.08e4
  • 1.13e4
  • 1.14e4
  • 1.15e4
71.18
  • 71.18
  • 63.76
  • 63.72
  • 62.13
  • 61.91
  • 61.52
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
8.83e3
  • 8.83e3
70.45
  • 70.45
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
9.09e3
  • 9.09e3
69.55
  • 69.55
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
9.17e3
  • 9.17e3
69.30
  • 69.30
AEIR
  • AEIR
UBERON:0001017central nervous system
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
9.60e3
  • 9.60e3
  • 9.96e3
  • 1.03e4
  • 1.07e4
67.85
  • 67.85
  • 66.65
  • 65.37
  • 64.27
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001905pineal body
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
9.96e3
  • 9.96e3
  • 1.03e4
  • 1.03e4
  • 1.07e4
  • 1.08e4
  • 1.10e4
  • 1.20e4
66.65
  • 66.65
  • 65.61
  • 65.61
  • 64.26
  • 63.87
  • 63.14
  • 59.98
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.02e4
  • 1.02e4
65.88
  • 65.88
AEIR
  • AEIR
CL:0000540neuron
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
1.12e4
  • 1.12e4
  • 1.12e4
  • 1.15e4
62.48
  • 62.48
  • 62.48
  • 61.34
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
1.17e4
  • 1.17e4
  • 1.21e4
60.76
  • 60.76
  • 59.48
AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.21e4
  • 1.21e4
59.46
  • 59.46
AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.22e4
  • 1.22e4
59.00
  • 59.00
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Clupeocephala1 geneCompare expression
Chordata2 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000026875.

Cross-references

EnsemblENSDARG00000026875 (fam57ba)
ZFINZDB-GENE-030131-2046 (fam57ba)
EMBLBC059567, BX936284, CU914481
Uniprot/SPTREMBLF1QF55, F1QF55_DANRE, Q6PBV7, Q6PBV7_DANRE, X1WBY2, X1WBY2_DANRE, X1WFA7, X1WFA7_DANRE, X1WH51, X1WH51_DANRE, X1WHJ4, X1WHJ4_DANRE, X1WHT4, X1WHT4_DANRE

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