D. rerio Gene: slc48a1a - ENSDARG00000026907 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000026907
Nameslc48a1a
Descriptionsolute carrier family 48 (heme transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-040718-121]
OrganismDanio rerio (zebrafish)
Synonym(s)hrg1b, q6dh36, zgc:92662

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
1.95e3
  • 1.95e3
93.49
  • 93.49
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000023Segmentation:1-4 somites
  • UBERON:0000106zygote stage
  • UBERON:0004707pharyngula stage
  • UBERON:00072322 cell stage
  • UBERON:00072334 cell stage
  • UBERON:00072368 cell stage
  • ZFS:0000006Cleavage:32-cell
  • ZFS:0000007Cleavage:64-cell
  • ZFS:0000008Blastula:128-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000010Blastula:512-cell
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000012Blastula:High
  • ZFS:0000013Blastula:Oblong
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000005Cleavage:16-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000016Blastula:30%-epiboly
2.55e3
  • 2.55e3
  • 4.41e3
  • 4.98e3
  • 6.54e3
  • 6.64e3
  • 6.64e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.97e3
  • 6.97e3
  • 7.03e3
  • 7.03e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.91e3
  • 8.96e3
  • 8.96e3
91.46
  • 91.46
  • 85.22
  • 83.33
  • 78.12
  • 77.77
  • 77.77
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 76.66
  • 76.66
  • 76.46
  • 76.46
  • 74.99
  • 74.99
  • 74.99
  • 74.99
  • 73.52
  • 69.99
  • 69.99
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
5.08e3
  • 5.08e3
  • 1.14e4
82.99
  • 82.99
  • 61.71
AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
5.77e3
  • 5.77e3
80.69
  • 80.69
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
5.87e3
  • 5.87e3
80.33
  • 80.33
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
6.02e3
  • 6.02e3
  • 1.19e4
79.85
  • 79.85
  • 60.29
AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
6.04e3
  • 6.04e3
79.79
  • 79.79
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
6.31e3
  • 6.31e3
78.89
  • 78.89
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
7.05e3
  • 7.05e3
76.38
  • 76.38
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
7.08e3
  • 7.08e3
76.29
  • 76.29
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
7.97e3
  • 7.97e3
  • 1.43e4
  • 1.50e4
  • 1.56e4
  • 1.77e4
73.32
  • 73.32
  • 52.08
  • 49.85
  • 47.76
  • 40.72
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
9.58e3
  • 9.58e3
67.93
  • 67.93
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
9.62e3
  • 9.62e3
67.78
  • 67.78
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
9.73e3
  • 9.73e3
67.42
  • 67.42
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
9.93e3
  • 9.93e3
  • 1.04e4
66.75
  • 66.75
  • 65.12
AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
9.93e3
  • 9.93e3
66.75
  • 66.75
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.09e4
  • 1.09e4
63.60
  • 63.60
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
1.14e4
  • 1.14e4
  • 1.30e4
61.69
  • 61.69
  • 56.40
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.15e4
  • 1.15e4
61.49
  • 61.49
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.15e4
  • 1.15e4
61.45
  • 61.45
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.17e4
  • 1.17e4
  • 1.77e4
60.78
  • 60.78
  • 40.60
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.18e4
  • 1.18e4
60.63
  • 60.63
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.47e4
  • 1.47e4
50.76
  • 50.76
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.55e4
  • 1.55e4
48.19
  • 48.19
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.60e4
  • 1.60e4
46.28
  • 46.28
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.74e4
  • 1.74e4
41.58
  • 41.58
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Cross-references

EMBLAL929087, BC076146, CR293512
EnsemblENSDARG00000026907 (slc48a1a)
Uniprot/SWISSPROTHRG1B_DANRE, Q6ZM28
ZFINZDB-GENE-040718-121 (slc48a1a)

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