D. rerio Gene: ZNF197 (1 to many) - ENSDARG00000026972 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000026972
NameZNF197 (1 to many)
Descriptionsi:ch211-119o8.6 [Source:ZFIN;Acc:ZDB-GENE-070912-17]
OrganismDanio rerio (zebrafish)
Synonym(s)d3s1363e, p18, wu:fd19e01, zkscan9, znf166, zscan41
Paralog(s)14 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
4.00e3
  • 4.00e3
86.62
  • 86.62
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
4.17e3
  • 4.17e3
86.05
  • 86.05
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
4.17e3
  • 4.17e3
  • 4.49e3
  • 5.85e3
  • 6.64e3
  • 8.65e3
86.04
  • 86.04
  • 84.96
  • 80.41
  • 77.76
  • 71.02
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
6.77e3
  • 6.77e3
77.33
  • 77.33
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
7.61e3
  • 7.61e3
74.53
  • 74.53
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
9.73e3
  • 9.73e3
67.43
  • 67.43
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
1.02e4
  • 1.02e4
  • 1.61e4
  • 1.78e4
  • 1.79e4
  • 1.83e4
65.74
  • 65.74
  • 45.98
  • 40.43
  • 40.18
  • 38.62
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.08e4
  • 1.08e4
63.86
  • 63.86
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000109gastrula stage
  • ZFS:0000020Gastrula:75%-epiboly
1.12e4
  • 1.12e4
  • 1.17e4
  • 1.46e4
62.40
  • 62.40
  • 60.97
  • 51.19
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.19e4
  • 1.19e4
60.21
  • 60.21
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.24e4
  • 1.24e4
58.62
  • 58.62
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.25e4
  • 1.25e4
58.02
  • 58.02
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.30e4
  • 1.30e4
56.55
  • 56.55
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
1.44e4
  • 1.44e4
51.64
  • 51.64
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
1.47e4
  • 1.47e4
50.94
  • 50.94
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.47e4
  • 1.47e4
50.77
  • 50.77
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
1.82e4
  • 1.82e4
  • 2.06e4
39.06
  • 39.06
  • 31.02
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
2.01e4
  • 2.01e4
32.73
  • 32.73
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
2.03e4
  • 2.03e4
32.09
  • 32.09
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
2.04e4
  • 2.04e4
  • 2.26e4
  • 2.42e4
31.56
  • 31.56
  • 24.35
  • 19.07
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
2.36e4
  • 2.36e4
20.83
  • 20.83
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Opisthokonta14 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000026972.

Cross-references

EnsemblENSDARG00000026972 (ZNF197 (1 to many))
HGNCHGNC:12988 (ZNF197 (1 to many))
ZFINZDB-GENE-070912-17 (si:ch211-119o8.6)
EMBLAL953896
Uniprot/SPTREMBLB0R169, B0R169_DANRE, F1QB09, F1QB09_DANRE

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