D. rerio Gene: zgc:85777 - ENSDARG00000027009 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000027009
Namezgc:85777
Descriptionzgc:85777 [Source:ZFIN;Acc:ZDB-GENE-040426-2210]
OrganismDanio rerio (zebrafish)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
733
  • 733
  • 1.39e3
97.55
  • 97.55
  • 95.36
AEIR
  • AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
822
  • 822
97.25
  • 97.25
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
834
  • 834
  • 1.12e4
97.21
  • 97.21
  • 62.48
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
860
  • 860
97.12
  • 97.12
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
916
  • 916
96.94
  • 96.94
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.60e3
  • 1.60e3
94.65
  • 94.65
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.66e3
  • 1.66e3
94.46
  • 94.46
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.96e3
  • 1.96e3
93.46
  • 93.46
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
2.09e3
  • 2.09e3
93.02
  • 93.02
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
2.10e3
  • 2.10e3
92.96
  • 92.96
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
2.12e3
  • 2.12e3
  • 5.66e3
  • 7.19e3
  • 7.25e3
  • 8.25e3
  • 8.73e3
  • 9.56e3
  • 1.20e4
  • 1.24e4
  • 1.30e4
92.89
  • 92.89
  • 81.05
  • 75.94
  • 75.72
  • 72.38
  • 70.76
  • 67.98
  • 59.90
  • 58.40
  • 56.34
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.27e3
  • 2.27e3
92.40
  • 92.40
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
3.42e3
  • 3.42e3
88.55
  • 88.55
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
3.45e3
  • 3.45e3
  • 3.91e3
88.44
  • 88.44
  • 86.92
AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
4.14e3
  • 4.14e3
86.13
  • 86.13
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
4.21e3
  • 4.21e3
  • 4.60e3
  • 5.84e3
85.90
  • 85.90
  • 84.59
  • 80.43
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000036Larval:Day 4
  • ZFS:0000037Larval:Day 5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000106zygote stage
  • UBERON:0000066fully formed stage
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
4.27e3
  • 4.27e3
  • 4.57e3
  • 4.98e3
  • 5.02e3
  • 5.42e3
  • 5.82e3
  • 5.98e3
  • 8.49e3
  • 9.34e3
  • 9.53e3
  • 1.03e4
  • 1.05e4
  • 1.17e4
  • 1.19e4
  • 1.20e4
  • 1.22e4
  • 1.23e4
  • 1.26e4
  • 1.32e4
  • 1.36e4
  • 1.46e4
  • 1.50e4
85.71
  • 85.71
  • 84.69
  • 83.33
  • 83.20
  • 81.86
  • 80.50
  • 79.99
  • 71.58
  • 68.74
  • 68.10
  • 65.48
  • 64.69
  • 60.77
  • 60.03
  • 59.68
  • 59.28
  • 58.87
  • 57.91
  • 55.92
  • 54.61
  • 51.01
  • 49.92
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
4.45e3
  • 4.45e3
  • 6.98e3
  • 8.65e3
  • 8.81e3
85.11
  • 85.11
  • 76.65
  • 71.05
  • 70.51
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000104life cycle
4.85e3
  • 4.85e3
  • 8.57e3
  • 1.49e4
83.77
  • 83.77
  • 71.30
  • 49.94
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
4.89e3
  • 4.89e3
83.64
  • 83.64
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
5.06e3
  • 5.06e3
83.06
  • 83.06
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
5.16e3
  • 5.16e3
82.72
  • 82.72
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
6.76e3
  • 6.76e3
  • 9.03e3
77.37
  • 77.37
  • 69.76
AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
7.69e3
  • 7.69e3
74.25
  • 74.25
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.10e4
  • 1.10e4
63.07
  • 63.07
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.16e4
  • 1.16e4
61.23
  • 61.23
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.22e4
  • 1.22e4
59.13
  • 59.13
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • UBERON:0000109gastrula stage
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000017Gastrula:50%-epiboly
1.22e4
  • 1.22e4
  • 1.32e4
  • 1.42e4
  • 1.46e4
  • 1.67e4
  • 1.68e4
59.12
  • 59.12
  • 55.80
  • 52.54
  • 51.09
  • 44.11
  • 43.69
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
1.24e4
  • 1.24e4
58.43
  • 58.43
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000066fully formed stage
1.34e4
  • 1.34e4
  • 1.46e4
55.16
  • 55.16
  • 51.26
AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000015Blastula:Dome
1.42e4
  • 1.42e4
  • 1.43e4
  • 1.66e4
  • 1.67e4
  • 1.70e4
52.55
  • 52.55
  • 51.99
  • 44.32
  • 44.17
  • 43.10
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
1.71e4
  • 1.71e4
42.86
  • 42.86
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EMBLBC067617, BX537314
EnsemblENSDARG00000027009 (zgc:85777)
Uniprot/SPTREMBLQ6NWF0, Q6NWF0_DANRE
ZFINZDB-GENE-040426-2210 (zgc:85777)

Do not show this banner again