D. rerio Gene: tmem169a - ENSDARG00000027131 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000027131
Nametmem169a
Descriptiontransmembrane protein 169a [Source:ZFIN;Acc:ZDB-GENE-090107-1]
OrganismDanio rerio (zebrafish)
Synonym(s)tmem169

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
5.48e3
  • 5.48e3
  • 8.01e3
81.67
  • 81.67
  • 73.18
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
6.57e3
  • 6.57e3
  • 8.57e3
  • 8.95e3
  • 9.24e3
  • 1.01e4
78.02
  • 78.02
  • 71.30
  • 70.03
  • 69.06
  • 66.17
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
8.47e3
  • 8.47e3
71.65
  • 71.65
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
8.61e3
  • 8.61e3
71.17
  • 71.17
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
9.70e3
  • 9.70e3
  • 1.04e4
67.53
  • 67.53
  • 65.27
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
9.82e3
  • 9.82e3
  • 2.00e4
67.13
  • 67.13
  • 33.04
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.04e4
  • 1.04e4
  • 1.40e4
65.27
  • 65.27
  • 53.26
AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.10e4
  • 1.10e4
63.22
  • 63.22
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.12e4
  • 1.12e4
62.34
  • 62.34
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.23e4
  • 1.23e4
58.79
  • 58.79
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
1.37e4
  • 1.37e4
53.98
  • 53.98
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.61e4
  • 1.61e4
46.25
  • 46.25
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.64e4
  • 1.64e4
45.13
  • 45.13
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.05e4
  • 2.05e4
31.30
  • 31.30
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
2.11e4
  • 2.11e4
29.19
  • 29.19
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.21e4
  • 2.21e4
26.03
  • 26.03
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
2.33e4
  • 2.33e4
21.99
  • 21.99
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.34e4
  • 2.34e4
21.50
  • 21.50
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSDARG00000027131 (tmem169a)
ZFINZDB-GENE-090107-1 (tmem169a)
EMBLBX323548
Uniprot/SPTREMBLE7F6S9, E7F6S9_DANRE

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