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D. rerio Gene: phactr2 - ENSDARG00000027172 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000027172
Namephactr2
Descriptionphosphatase and actin regulator 2 [Source:ZFIN;Acc:ZDB-GENE-040724-11]
OrganismDanio rerio (zebrafish)
Synonym(s)si:ch211-8a9.4, zc8a9.4
Orthologs(s)19 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
3.29e3
  • 3.29e3
89.00
  • 89.00
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
4.06e3
  • 4.06e3
86.42
  • 86.42
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
4.09e3
  • 4.09e3
86.32
  • 86.32
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
4.58e3
  • 4.58e3
  • 6.17e3
84.67
  • 84.67
  • 79.34
AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
4.77e3
  • 4.77e3
  • 7.36e3
84.04
  • 84.04
  • 75.36
AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
5.03e3
  • 5.03e3
83.15
  • 83.15
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
5.20e3
  • 5.20e3
82.59
  • 82.59
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
5.25e3
  • 5.25e3
82.43
  • 82.43
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
5.31e3
  • 5.31e3
82.23
  • 82.23
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
5.43e3
  • 5.43e3
81.81
  • 81.81
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
5.44e3
  • 5.44e3
  • 8.57e3
  • 9.50e3
  • 1.13e4
  • 1.18e4
81.78
  • 81.78
  • 71.31
  • 68.19
  • 62.01
  • 60.63
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
6.06e3
  • 6.06e3
79.70
  • 79.70
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
6.39e3
  • 6.39e3
78.62
  • 78.62
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
6.85e3
  • 6.85e3
77.08
  • 77.08
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
7.14e3
  • 7.14e3
76.08
  • 76.08
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
7.40e3
  • 7.40e3
  • 1.36e4
75.22
  • 75.22
  • 54.33
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
7.66e3
  • 7.66e3
74.34
  • 74.34
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
8.93e3
  • 8.93e3
70.11
  • 70.11
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
9.93e3
  • 9.93e3
  • 1.22e4
66.75
  • 66.75
  • 59.07
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
9.97e3
  • 9.97e3
66.61
  • 66.61
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
1.20e4
  • 1.20e4
  • 1.75e4
59.79
  • 59.79
  • 41.41
AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.35e4
  • 1.35e4
54.88
  • 54.88
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.40e4
  • 1.40e4
53.04
  • 53.04
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Cross-references

EnsemblENSDARG00000027172 (phactr2)
ZFINZDB-GENE-040724-11 (phactr2)
EMBLAL772289
Uniprot/SPTREMBLF1QEV9, F1QEV9_DANRE, Q6ZM79, Q6ZM79_DANRE

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