D. rerio Gene: tcp11l2 - ENSDARG00000027316 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000027316
Nametcp11l2
Descriptiont-complex 11, testis-specific-like 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1956]
OrganismDanio rerio (zebrafish)
Synonym(s)wu:fc48b04, zgc:73347

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
1.25e3
  • 1.25e3
  • 1.85e3
95.83
  • 95.83
  • 93.79
AEIR
  • AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
1.29e3
  • 1.29e3
95.69
  • 95.69
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000031Pharyngula:Prim-25
1.94e3
  • 1.94e3
  • 2.95e3
  • 4.99e3
  • 7.01e3
93.51
  • 93.51
  • 90.13
  • 83.28
  • 76.54
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000037Larval:Day 5
  • ZFS:0000036Larval:Day 4
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000042Juvenile:Days 30-44
  • UBERON:0000106zygote stage
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000026Segmentation:14-19 somites
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
2.06e3
  • 2.06e3
  • 2.26e3
  • 3.46e3
  • 4.77e3
  • 5.03e3
  • 5.32e3
  • 5.35e3
  • 5.74e3
  • 5.98e3
  • 6.23e3
  • 7.47e3
  • 8.14e3
  • 8.67e3
  • 9.46e3
  • 1.41e4
  • 1.44e4
93.09
  • 93.09
  • 92.45
  • 88.43
  • 84.05
  • 83.18
  • 82.20
  • 82.09
  • 80.78
  • 79.98
  • 79.14
  • 74.99
  • 72.76
  • 70.98
  • 68.31
  • 52.87
  • 51.88
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000025Segmentation:10-13 somites
2.22e3
  • 2.22e3
  • 3.72e3
  • 3.78e3
  • 4.78e3
  • 5.47e3
  • 5.58e3
  • 6.10e3
  • 6.61e3
  • 6.96e3
  • 7.39e3
92.59
  • 92.59
  • 87.54
  • 87.36
  • 84.00
  • 81.68
  • 81.32
  • 79.59
  • 77.88
  • 76.68
  • 75.27
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
2.76e3
  • 2.76e3
  • 3.49e3
  • 3.81e3
90.77
  • 90.77
  • 88.31
  • 87.23
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
3.04e3
  • 3.04e3
89.82
  • 89.82
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
3.19e3
  • 3.19e3
89.33
  • 89.33
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
3.25e3
  • 3.25e3
89.12
  • 89.12
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
3.35e3
  • 3.35e3
88.78
  • 88.78
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
3.38e3
  • 3.38e3
88.67
  • 88.67
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
3.39e3
  • 3.39e3
88.67
  • 88.67
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
3.77e3
  • 3.77e3
  • 4.25e3
87.39
  • 87.39
  • 85.76
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
3.80e3
  • 3.80e3
87.30
  • 87.30
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • UBERON:0000109gastrula stage
4.11e3
  • 4.11e3
  • 4.41e3
  • 4.58e3
  • 4.72e3
  • 5.31e3
  • 7.50e3
86.25
  • 86.25
  • 85.22
  • 84.67
  • 84.19
  • 82.21
  • 74.89
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
4.13e3
  • 4.13e3
86.18
  • 86.18
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
4.71e3
  • 4.71e3
84.23
  • 84.23
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
4.80e3
  • 4.80e3
  • 6.62e3
83.91
  • 83.91
  • 77.85
AEIR
  • AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
5.23e3
  • 5.23e3
  • 5.75e3
82.48
  • 82.48
  • 80.74
AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
5.64e3
  • 5.64e3
81.12
  • 81.12
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
5.68e3
  • 5.68e3
80.98
  • 80.98
AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
5.75e3
  • 5.75e3
80.76
  • 80.76
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
6.03e3
  • 6.03e3
79.83
  • 79.83
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
6.63e3
  • 6.63e3
77.80
  • 77.80
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
6.75e3
  • 6.75e3
77.38
  • 77.38
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
7.13e3
  • 7.13e3
76.14
  • 76.14
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
7.31e3
  • 7.31e3
75.51
  • 75.51
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000011Blastula:1k-cell
8.20e3
  • 8.20e3
  • 8.58e3
  • 1.05e4
  • 1.08e4
  • 1.10e4
72.55
  • 72.55
  • 71.26
  • 64.86
  • 63.86
  • 63.29
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
8.36e3
  • 8.36e3
72.01
  • 72.01
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
9.30e3
  • 9.30e3
68.86
  • 68.86
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
9.56e3
  • 9.56e3
67.98
  • 67.98
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Cross-references

EMBLBX001012, BX649500
EnsemblENSDARG00000027316 (tcp11l2)
Uniprot/SPTREMBLQ5RGW3, Q5RGW3_DANRE
ZFINZDB-GENE-040426-1956 (tcp11l2)

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