Gene: grip2b - ENSDARG00000027618 - Danio rerio (zebrafish)

General information

Ensembl ID	ENSDARG00000027618
Name	grip2b
Description	glutamate receptor interacting protein 2b [Source:ZFIN;Acc:ZDB-GENE-070705-172]
Organism	Danio rerio (zebrafish)
Synonym(s)	si:ch211-279i17.1
Orthologs(s)	22 orthologs
Paralog(s)	1 paralogs

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0000966	retina	[+] 1 stage ZFS:0000037Larval:Day 5	1.13e4 1.13e4	62.33 62.33	AEIR AEIR
UBERON:0000992	female gonad	[+] 1 stage UBERON:0000066fully formed stage	1.35e4 1.35e4	54.65 54.65	AEIR AEIR
UBERON:0019248	early embryo	[+] 1 stage UBERON:0000107cleavage stage	1.58e4 1.58e4	47.10 47.10	AEIR AEIR
UBERON:0000955	brain	[+] 1 stage UBERON:0000066fully formed stage	1.68e4 1.68e4	43.66 43.66	AEIR AEIR
UBERON:0000307	blastula	[+] 1 stage ZFS:0000011Blastula:1k-cell	1.72e4 1.72e4	42.31 42.31	AEIR AEIR
UBERON:0002113	kidney	[+] 1 stage UBERON:0000066fully formed stage	1.95e4 1.95e4	34.87 34.87	AEIR AEIR
UBERON:0000948	heart	[+] 1 stage UBERON:0000066fully formed stage	1.98e4 1.98e4	33.84 33.84	AEIR AEIR
UBERON:0002481	bone tissue	[+] 1 stage UBERON:0000066fully formed stage	2.22e4 2.22e4	25.51 25.51	AEIR AEIR
UBERON:0000922	embryo	[+] 2 stages ZFS:0000037Larval:Day 5 UBERON:0000068embryo stage	2.26e4 2.26e4 2.41e4	24.19 24.19 19.17	AEIR AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

RNA-Seq data: Bgee

Sources of raw data:

RNA-Seq data: GEO

Orthologs

Taxon name	Species with orthologs	Gene(s)	Expression comparison	See details
Euteleostomi	16 species Homo sapiens (human) Mus musculus (mouse) Gorilla gorilla (gorilla) Macaca mulatta (macaque) Rattus norvegicus (rat) Bos taurus (cattle) Sus scrofa (pig) Equus caballus (horse) Oryctolagus cuniculus (rabbit) Canis lupus familiaris (dog) Felis catus (cat) Cavia porcellus (guinea pig) Monodelphis domestica (opossum) Gallus gallus (chicken) Anolis carolinensis (green anole) Xenopus tropicalis (western clawed frog)	16 genes ENSG00000144596 GRIP2 ENSMUSG00000030098 Grip2 ENSGGOG00000002279 GRIP2 ENSMMUG00000006342 GRIP2 ENSRNOG00000009726 Grip2 ENSBTAG00000011896 GRIP2 ENSSSCG00000011599 GRIP2 ENSECAG00000013613 GRIP2 ENSOCUG00000001145 GRIP2 ENSCAFG00000004492 GRIP2 ENSFCAG00000007655 GRIP2 ENSCPOG00000021047 GRIP2 ENSMODG00000007232 ENSGALG00000006449 ENSACAG00000013280 ENSXETG00000011516 grip2	Compare expression	[+]
Bilateria	22 species Homo sapiens (human) Mus musculus (mouse) Drosophila melanogaster (fruit fly) Gorilla gorilla (gorilla) Macaca mulatta (macaque) Rattus norvegicus (rat) Bos taurus (cattle) Sus scrofa (pig) Equus caballus (horse) Oryctolagus cuniculus (rabbit) Canis lupus familiaris (dog) Felis catus (cat) Cavia porcellus (guinea pig) Monodelphis domestica (opossum) Gallus gallus (chicken) Anolis carolinensis (green anole) Xenopus tropicalis (western clawed frog) Drosophila ananassae Drosophila mojavensis Drosophila simulans Drosophila virilis Drosophila yakuba	22 genes ENSG00000144596 GRIP2 ENSMUSG00000030098 Grip2 FBgn0029830 Grip ENSGGOG00000002279 GRIP2 ENSMMUG00000006342 GRIP2 ENSRNOG00000009726 Grip2 ENSBTAG00000011896 GRIP2 ENSSSCG00000011599 GRIP2 ENSECAG00000013613 GRIP2 ENSOCUG00000001145 GRIP2 ENSCAFG00000004492 GRIP2 ENSFCAG00000007655 GRIP2 ENSCPOG00000021047 GRIP2 ENSMODG00000007232 ENSGALG00000006449 ENSACAG00000013280 ENSXETG00000011516 grip2 FBgn0099086 GF22087 FBgn0138069 GI15320 FBgn0188362 GD16775 FBgn0201962 GJ14758 FBgn0235026 GE17569	Compare expression	[+]

Orthology information comes from OMA : ENSDARG00000027618.

Paralogs (same species)

Taxon name	Gene(s)	Expression comparison	See details
Chordata	1 gene ENSDARG00000015053 grip1	Compare expression	[+]

Paralogy information comes from OMA : ENSDARG00000027618.

Cross-references

Ensembl	ENSDARG00000027618 (grip2b)
ZFIN	ZDB-GENE-070705-172 (grip2b)
EMBL	CR388001, CR392343, CR974469
Uniprot/SPTREMBL	F1QBX5, F1QBX5_DANRE, F1RD62, F1RD62_DANRE