D. rerio Gene: zgc:165539 - ENSDARG00000027639 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000027639
Namezgc:165539
Descriptionzgc:165539 [Source:ZFIN;Acc:ZDB-GENE-030131-5478]
OrganismDanio rerio (zebrafish)
Synonym(s)fd19g12, wu:fd19g12

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
52.9
  • 52.9
99.83
  • 99.83
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
131
  • 131
99.56
  • 99.56
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
182
  • 182
99.39
  • 99.39
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
345
  • 345
98.85
  • 98.85
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
447
  • 447
98.51
  • 98.51
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
547
  • 547
98.17
  • 98.17
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.58e3
  • 1.58e3
94.73
  • 94.73
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000109gastrula stage
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
1.96e3
  • 1.96e3
  • 4.43e3
  • 5.09e3
  • 5.16e3
  • 6.63e3
  • 8.85e3
93.43
  • 93.43
  • 85.17
  • 82.96
  • 82.73
  • 77.80
  • 70.36
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
2.16e3
  • 2.16e3
92.76
  • 92.76
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000016Blastula:30%-epiboly
2.35e3
  • 2.35e3
  • 2.65e3
  • 2.84e3
  • 3.46e3
  • 4.20e3
92.13
  • 92.13
  • 91.11
  • 90.49
  • 88.42
  • 85.95
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • UBERON:0000106zygote stage
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
3.81e3
  • 3.81e3
  • 4.84e3
  • 5.14e3
  • 5.34e3
  • 5.89e3
  • 7.16e3
  • 9.60e3
  • 1.44e4
  • 1.74e4
  • 1.78e4
87.23
  • 87.23
  • 83.81
  • 82.80
  • 82.14
  • 80.26
  • 76.02
  • 67.86
  • 51.66
  • 41.84
  • 40.45
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
3.97e3
  • 3.97e3
86.69
  • 86.69
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
4.03e3
  • 4.03e3
86.52
  • 86.52
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
4.51e3
  • 4.51e3
84.90
  • 84.90
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
6.33e3
  • 6.33e3
78.79
  • 78.79
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
6.51e3
  • 6.51e3
78.21
  • 78.21
AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
8.99e3
  • 8.99e3
69.90
  • 69.90
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
9.60e3
  • 9.60e3
  • 1.06e4
  • 1.19e4
  • 1.56e4
  • 1.60e4
  • 1.76e4
  • 2.06e4
  • 2.22e4
67.85
  • 67.85
  • 64.36
  • 60.17
  • 47.69
  • 46.38
  • 40.94
  • 31.11
  • 25.76
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
1.02e4
  • 1.02e4
65.77
  • 65.77
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.05e4
  • 1.05e4
65.00
  • 65.00
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.13e4
  • 1.13e4
62.13
  • 62.13
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.39e4
  • 1.39e4
53.60
  • 53.60
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
1.39e4
  • 1.39e4
53.52
  • 53.52
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.61e4
  • 1.61e4
46.05
  • 46.05
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.81e4
  • 1.81e4
39.40
  • 39.40
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
1.83e4
  • 1.83e4
  • 1.92e4
38.74
  • 38.74
  • 35.80
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
1.88e4
  • 1.88e4
37.03
  • 37.03
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
2.10e4
  • 2.10e4
29.78
  • 29.78
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
2.25e4
  • 2.25e4
24.62
  • 24.62
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.57e4
  • 2.57e4
13.93
  • 13.93
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

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