D. rerio Gene: irf10 - ENSDARG00000027658 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000027658
Nameirf10
Descriptioninterferon regulatory factor 10 [Source:ZFIN;Acc:ZDB-GENE-040426-2084]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:76891
Orthologs(s)5 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000468multi-cellular organism
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
  • UBERON:0000066fully formed stage
5.77e3
  • 5.77e3
  • 1.14e4
  • 1.22e4
  • 1.22e4
  • 1.24e4
  • 1.39e4
80.67
  • 80.67
  • 61.70
  • 59.08
  • 59.08
  • 58.32
  • 53.30
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
5.93e3
  • 5.93e3
80.15
  • 80.15
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
6.85e3
  • 6.85e3
77.08
  • 77.08
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
7.55e3
  • 7.55e3
74.74
  • 74.74
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
7.83e3
  • 7.83e3
73.77
  • 73.77
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
8.06e3
  • 8.06e3
73.03
  • 73.03
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
8.31e3
  • 8.31e3
72.18
  • 72.18
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.01e4
  • 1.01e4
66.14
  • 66.14
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.01e4
  • 1.01e4
66.10
  • 66.10
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.18e4
  • 1.18e4
60.63
  • 60.63
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.28e4
  • 1.28e4
57.03
  • 57.03
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
1.41e4
  • 1.41e4
  • 1.52e4
52.62
  • 52.62
  • 48.99
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.44e4
  • 1.44e4
51.82
  • 51.82
AEIR
  • AEIR
UBERON:0000080mesonephros
  • UBERON:0000104life cycle
1.50e4
  • 1.50e4
49.92
  • 49.92
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.50e4
  • 1.50e4
49.76
  • 49.76
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
1.56e4
  • 1.56e4
  • 1.59e4
47.82
  • 47.82
  • 46.65
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.57e4
  • 1.57e4
47.30
  • 47.30
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
1.58e4
  • 1.58e4
47.15
  • 47.15
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.59e4
  • 1.59e4
46.86
  • 46.86
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.76e4
  • 1.76e4
41.16
  • 41.16
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.83e4
  • 1.83e4
38.86
  • 38.86
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
1.85e4
  • 1.85e4
  • 2.06e4
  • 2.17e4
  • 2.41e4
38.18
  • 38.18
  • 31.02
  • 27.33
  • 19.36
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
1.94e4
  • 1.94e4
35.00
  • 35.00
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
2.02e4
  • 2.02e4
32.30
  • 32.30
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
2.15e4
  • 2.15e4
  • 2.30e4
28.07
  • 28.07
  • 23.03
AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
2.29e4
  • 2.29e4
23.16
  • 23.16
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • EST data: UniGene
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Orthologs

Cross-references

EnsemblENSDARG00000027658 (irf10)
ZFINZDB-GENE-040426-2084 (irf10)
EMBLBC153602, BX323461, CU062427
Uniprot/SPTREMBLA8E5I1, A8E5I1_DANRE, E9QBC1, E9QBC1_DANRE

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