D. rerio Gene: tmem230a - ENSDARG00000027687 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000027687
Nametmem230a
Descriptiontransmembrane protein 230a [Source:ZFIN;Acc:ZDB-GENE-040822-20]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:101123

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000468multi-cellular organism
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000106zygote stage
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000036Larval:Day 4
  • UBERON:0000068embryo stage
3.56e3
  • 3.56e3
  • 1.20e4
  • 1.20e4
  • 1.21e4
  • 1.21e4
  • 1.23e4
  • 1.23e4
  • 1.25e4
  • 1.29e4
  • 1.30e4
  • 1.33e4
  • 1.33e4
  • 1.34e4
  • 1.34e4
  • 1.39e4
  • 1.49e4
88.10
  • 88.10
  • 59.98
  • 59.66
  • 59.43
  • 59.37
  • 58.84
  • 58.81
  • 58.18
  • 56.86
  • 56.60
  • 55.62
  • 55.53
  • 55.21
  • 55.01
  • 53.50
  • 50.20
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
5.22e3
  • 5.22e3
82.52
  • 82.52
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
6.28e3
  • 6.28e3
  • 9.14e3
78.97
  • 78.97
  • 69.40
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
6.54e3
  • 6.54e3
  • 1.16e4
78.09
  • 78.09
  • 61.18
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
6.74e3
  • 6.74e3
  • 1.00e4
  • 1.17e4
77.43
  • 77.43
  • 66.44
  • 60.98
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
7.07e3
  • 7.07e3
76.35
  • 76.35
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
7.67e3
  • 7.67e3
74.33
  • 74.33
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
7.73e3
  • 7.73e3
  • 8.52e3
74.11
  • 74.11
  • 71.49
AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000109gastrula stage
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
8.08e3
  • 8.08e3
  • 9.28e3
  • 1.02e4
  • 1.12e4
  • 1.13e4
  • 1.17e4
72.94
  • 72.94
  • 68.93
  • 65.80
  • 62.43
  • 62.20
  • 60.77
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
8.46e3
  • 8.46e3
71.67
  • 71.67
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
8.47e3
  • 8.47e3
71.64
  • 71.64
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
8.53e3
  • 8.53e3
71.43
  • 71.43
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
9.02e3
  • 9.02e3
69.79
  • 69.79
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
9.64e3
  • 9.64e3
67.72
  • 67.72
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
9.91e3
  • 9.91e3
66.82
  • 66.82
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
9.94e3
  • 9.94e3
66.71
  • 66.71
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.01e4
  • 1.01e4
66.03
  • 66.03
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000024Segmentation:5-9 somites
  • UBERON:0004707pharyngula stage
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
1.05e4
  • 1.05e4
  • 1.09e4
  • 1.14e4
  • 1.15e4
  • 1.16e4
  • 1.21e4
  • 1.22e4
  • 1.39e4
  • 1.55e4
  • 1.55e4
65.00
  • 65.00
  • 63.39
  • 61.98
  • 61.51
  • 61.07
  • 59.55
  • 59.04
  • 53.49
  • 48.17
  • 48.13
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000009Blastula:256-cell
1.06e4
  • 1.06e4
  • 1.09e4
  • 1.09e4
  • 1.30e4
64.55
  • 64.55
  • 63.60
  • 63.54
  • 56.34
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.08e4
  • 1.08e4
63.88
  • 63.88
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.08e4
  • 1.08e4
63.71
  • 63.71
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.10e4
  • 1.10e4
63.07
  • 63.07
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.11e4
  • 1.11e4
62.78
  • 62.78
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.12e4
  • 1.12e4
62.67
  • 62.67
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.13e4
  • 1.13e4
  • 1.61e4
62.11
  • 62.11
  • 45.98
AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
1.17e4
  • 1.17e4
60.87
  • 60.87
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.19e4
  • 1.19e4
60.07
  • 60.07
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.30e4
  • 1.30e4
56.48
  • 56.48
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.31e4
  • 1.31e4
56.17
  • 56.17
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000037Larval:Day 5
1.34e4
  • 1.34e4
  • 1.52e4
  • 1.60e4
55.09
  • 55.09
  • 49.07
  • 46.44
AEIR
  • AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Cross-references

EMBLAL928672, BC080236
EnsemblENSDARG00000027687 (tmem230a)
Uniprot/SPTREMBLQ68EJ3, Q68EJ3_DANRE
ZFINZDB-GENE-040822-20 (tmem230a)

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