D. rerio Gene: CLDN23 (1 to many) - ENSDARG00000028096 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000028096
NameCLDN23 (1 to many)
Descriptionsi:ch211-95j8.2 [Source:ZFIN;Acc:ZDB-GENE-091204-28]
OrganismDanio rerio (zebrafish)
Synonym(s)cldnl

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
638
  • 638
97.87
  • 97.87
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000036Larval:Day 4
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000106zygote stage
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
669
  • 669
  • 1.38e3
  • 1.45e3
  • 1.85e3
  • 2.67e3
  • 3.72e3
  • 4.82e3
  • 4.96e3
  • 5.20e3
  • 6.06e3
  • 6.13e3
  • 6.71e3
  • 1.23e4
  • 1.35e4
  • 1.38e4
  • 1.42e4
  • 1.50e4
97.76
  • 97.76
  • 95.38
  • 95.14
  • 93.80
  • 91.08
  • 87.56
  • 83.86
  • 83.40
  • 82.59
  • 79.72
  • 79.49
  • 77.53
  • 58.96
  • 54.65
  • 53.71
  • 52.43
  • 49.92
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • UBERON:0000109gastrula stage
  • ZFS:0000022Gastrula:Bud
867
  • 867
  • 1.11e3
  • 1.57e3
  • 1.59e3
  • 2.15e3
  • 2.54e3
97.10
  • 97.10
  • 96.29
  • 94.75
  • 94.70
  • 92.81
  • 91.50
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000011Blastula:1k-cell
1.63e3
  • 1.63e3
  • 2.01e3
  • 1.30e4
  • 1.68e4
94.53
  • 94.53
  • 93.26
  • 56.61
  • 43.61
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
1.64e3
  • 1.64e3
  • 2.18e3
94.53
  • 94.53
  • 92.70
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
3.28e3
  • 3.28e3
89.00
  • 89.00
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
3.58e3
  • 3.58e3
  • 1.18e4
88.01
  • 88.01
  • 60.54
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000024Segmentation:5-9 somites
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
3.95e3
  • 3.95e3
  • 4.26e3
  • 4.41e3
  • 4.92e3
  • 5.01e3
  • 5.80e3
  • 6.27e3
  • 6.35e3
  • 1.08e4
  • 1.16e4
86.79
  • 86.79
  • 85.75
  • 85.25
  • 83.54
  • 83.24
  • 80.57
  • 79.01
  • 78.73
  • 63.86
  • 61.26
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
5.11e3
  • 5.11e3
  • 5.31e3
  • 6.04e3
82.88
  • 82.88
  • 82.23
  • 79.79
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
6.40e3
  • 6.40e3
78.58
  • 78.58
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
9.02e3
  • 9.02e3
69.80
  • 69.80
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.15e4
  • 1.15e4
61.46
  • 61.46
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.22e4
  • 1.22e4
59.24
  • 59.24
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.23e4
  • 1.23e4
58.90
  • 58.90
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.31e4
  • 1.31e4
56.21
  • 56.21
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.31e4
  • 1.31e4
56.03
  • 56.03
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.35e4
  • 1.35e4
54.66
  • 54.66
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.41e4
  • 1.41e4
  • 1.89e4
52.83
  • 52.83
  • 36.61
AEIR
  • AEIR
  • AEIR
UBERON:0000019camera-type eye
  • UBERON:0000066fully formed stage
1.46e4
  • 1.46e4
51.26
  • 51.26
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.53e4
  • 1.53e4
48.73
  • 48.73
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
2.24e4
  • 2.24e4
25.06
  • 25.06
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Cross-references

EMBLCR536613, CT027832
EnsemblENSDARG00000028096 (CLDN23 (1 to many))
HGNCHGNC:17591 (CLDN23 (1 to many))
Uniprot/SPTREMBLF1Q6Q0, F1Q6Q0_DANRE, X1WFL1, X1WFL1_DANRE
ZFINZDB-GENE-091204-28 (si:ch211-95j8.2)

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